4.6 Article

Bacterial Communities Present Distinct Co-occurrence Networks in Sediment and Water of the Thermokarst Lakes in the Yellow River Source Area

Related references

Note: Only part of the references are listed.
Article Environmental Sciences

Biogeochemistry of macrophytes, sediments and porewaters in thermokarst lakes of permafrost peatlands, western Siberia

Rinat M. Manasypov et al.

Summary: The chemical composition of thermokarst lake ecosystem components is important for understanding current climate change and permafrost thaw. Macrophytes play a crucial role in controlling nutrients and toxicants in lake water, with accumulation patterns varying among different plant species. Future climate warming may lead to increased uptake of heavy metals and lithogenic elements by macrophytes, impacting nutrient transport from soils to lakes and rivers.

SCIENCE OF THE TOTAL ENVIRONMENT (2021)

Review Biochemistry & Molecular Biology

Roles of Thermokarst Lakes in a Warming World

Michiel H. in't Zandt et al.

TRENDS IN MICROBIOLOGY (2020)

Review Mathematical & Computational Biology

NCBI Taxonomy: a comprehensive update on curation, resources and tools

Conrad L. Schoch et al.

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2020)

Article Biodiversity Conservation

Spatiotemporal remote sensing of ecosystem change and causation across Alaska

Neal J. Pastick et al.

GLOBAL CHANGE BIOLOGY (2019)

Article Biotechnology & Applied Microbiology

Secretomic analyses of Ruminiclostridium papyrosolvens reveal its enzymatic basis for lignocellulose degradation

Zhenxing Ren et al.

BIOTECHNOLOGY FOR BIOFUELS (2019)

Review Microbiology

Keystone taxa as drivers of microbiome structure and functioning

Samiran Banerjee et al.

NATURE REVIEWS MICROBIOLOGY (2018)

Article Multidisciplinary Sciences

Soil bacterial networks are less stable under drought than fungal networks

Franciska T. de Vries et al.

NATURE COMMUNICATIONS (2018)

Article Microbiology

Determinants of bacterial communities in Canadian agroforestry systems

Samiran Banerjee et al.

ENVIRONMENTAL MICROBIOLOGY (2016)

Article Ecology

PIECEWISESEM: Piecewise structural equation modelling in R for ecology, evolution, and systematics

Jonathan S. Lefcheck

METHODS IN ECOLOGY AND EVOLUTION (2016)

Article Biodiversity Conservation

Permafrost thaw and intense thermokarst activity decreases abundance of stream benthic macroinvertebrates

Krista S. Chin et al.

GLOBAL CHANGE BIOLOGY (2016)

Article Environmental Sciences

Biogeochemical and microbial seasonal dynamics between water column and sediment processes in a productive mountain lake: Georgetown Lake, MT, USA

Stephen R. Parker et al.

JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2016)

Article Multidisciplinary Sciences

Networks Depicting the Fine-Scale Co-Occurrences of Fungi in Soil Horizons

Hirokazu Toju et al.

PLOS ONE (2016)

Article Biochemistry & Molecular Biology

Atmospheric N deposition alters connectance, but not functional potential among saprotrophic bacterial communities

Zachary B. Freedman et al.

MOLECULAR ECOLOGY (2015)

Review Environmental Sciences

Elevation-dependent warming in mountain regions of the world

N. Pepin et al.

NATURE CLIMATE CHANGE (2015)

Article Environmental Sciences

Changes in lake area in response to thermokarst processes and climate in Old Crow Flats, Yukon

T. C. Lantz et al.

JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2015)

Article Microbiology

Network analysis reveals that bacteria and fungi form modules that correlate independently with soil parameters

Alexandre B. de Menezes et al.

ENVIRONMENTAL MICROBIOLOGY (2015)

Article Multidisciplinary Sciences

Fluvial network organization imprints on microbial co-occurrence networks

Stefanie Widder et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Biology

Biodiversity and multifunctionality in a microbial community: a novel theoretical approach to quantify functional redundancy

Takeshi Miki et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2014)

Article Biochemistry & Molecular Biology

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast et al.

NUCLEIC ACIDS RESEARCH (2013)

Review Geography, Physical

Advances in Thermokarst Research

S. V. Kokelj et al.

PERMAFROST AND PERIGLACIAL PROCESSES (2013)

Article Multidisciplinary Sciences

Metabolic modeling of species interaction in the human microbiome elucidates community-level assembly rules

Roie Levy et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Biochemical Research Methods

Molecular ecological network analyses

Ye Deng et al.

BMC BIOINFORMATICS (2012)

Review Microbiology

Microbial interactions: from networks to models

Karoline Faust et al.

NATURE REVIEWS MICROBIOLOGY (2012)

Article Biotechnology & Applied Microbiology

Microbial diversity and composition of the sediment in the drinking water reservoir Saidenbach (Saxonia, Germany)

Kerstin Roeske et al.

SYSTEMATIC AND APPLIED MICROBIOLOGY (2012)

Letter Biochemical Research Methods

QIIME allows analysis of high-throughput community sequencing data

J. Gregory Caporaso et al.

NATURE METHODS (2010)

Article Gastroenterology & Hepatology

Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome

Carlos W. Nossa et al.

WORLD JOURNAL OF GASTROENTEROLOGY (2010)

Article Microbiology

Functional Molecular Ecological Networks

Jizhong Zhou et al.

Review Multidisciplinary Sciences

Microbial community structure and its functional implications

Jed A. Fuhrman

NATURE (2009)

Article Multidisciplinary Sciences

The modularity of pollination networks

Jens M. Olesen et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Ecology

Ecological network analysis: network construction

Brian D. Fath et al.

ECOLOGICAL MODELLING (2007)

Article Evolutionary Biology

Environmental variability and modularity of bacterial metabolic networks

Merav Parter et al.

BMC EVOLUTIONARY BIOLOGY (2007)

Article Multidisciplinary Sciences

Global patterns in bacterial diversity

Catherine A. Lozupone et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Multidisciplinary Sciences

Modularity and community structure in networks

M. E. J. Newman

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Review Microbiology

Microbial biogeography:: putting microorganisms on the map

JBH Martiny et al.

NATURE REVIEWS MICROBIOLOGY (2006)

Article Multidisciplinary Sciences

Disappearing Arctic lakes

LC Smith et al.

SCIENCE (2005)

Article Multidisciplinary Sciences

Functional cartography of complex metabolic networks

R Guimerà et al.

NATURE (2005)

Review Genetics & Heredity

Network biology:: Understanding the cell's functional organization

AL Barabási et al.

NATURE REVIEWS GENETICS (2004)

Article Environmental Sciences

Importance of sediment-water interactions in Coeur d'Alene Lake, Idaho, USA: management implications

JS Kuwabara et al.

ENVIRONMENTAL MANAGEMENT (2003)

Article Geography, Physical

Shrinking thermokarst ponds and groundwater dynamics in discontinuous permafrost near Council, Alaska

K Yoshikawa et al.

PERMAFROST AND PERIGLACIAL PROCESSES (2003)

Review Multidisciplinary Sciences

The diversity-stability debate

KS McCann

NATURE (2000)