4.6 Article

Genomic population structure associated with repeated escape of Salmonella enterica ATCC14028s from the laboratory into nature

Related references

Note: Only part of the references are listed.
Article Infectious Diseases

Outbreak of Central American born Shigella sonnei in two youth camps in Belgium in the summer of 2019

An Van den Bossche et al.

Summary: In 2019, a Shigella sonnei outbreak occurred in two youth camps in Belgium, with confirmed clustering of isolates from both camps and a subsequent infection of a technician. The outbreak strain clustered with internationally isolated strains from patients with recent travel history to Central America, demonstrating enhanced surveillance and international collaboration between public health institutes.

EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2021)

Article Biochemistry & Molecular Biology

Accurate reconstruction of bacterial pan- and core genomes with PEPPAN

Zhemin Zhou et al.

GENOME RESEARCH (2020)

Article Multidisciplinary Sciences

Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids

Santiago Redondo-Salvo et al.

NATURE COMMUNICATIONS (2020)

Article Biochemical Research Methods

RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference

Alexey M. Kozlov et al.

BIOINFORMATICS (2019)

Article Infectious Diseases

The diversity, evolution and ecology of Salmonella in venomous snakes

Caisey V. Pulford et al.

PLOS NEGLECTED TROPICAL DISEASES (2019)

Review Multidisciplinary Sciences

Sources of human infection by Salmonella enterica serotype Javiana: A systematic review

Nabanita Mukherjee et al.

PLOS ONE (2019)

Article Biochemistry & Molecular Biology

Roles of YcfR in Biofilm Formation in Salmonella Typhimurium ATCC 14028

Seul Kim et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2019)

Article Public, Environmental & Occupational Health

Commercial Frozen Mice Used by Owners to Feed Reptiles are Highly Externally Contaminated with Salmonella Enteritidis PT8

Clara Marin et al.

VECTOR-BORNE AND ZOONOTIC DISEASES (2018)

Article Biochemistry & Molecular Biology

GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens

Zhemin Zhou et al.

GENOME RESEARCH (2018)

Article Virology

Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10

Marc A. Suchard et al.

VIRUS EVOLUTION (2018)

Article Virology

TreeTime: Maximum-likelihood phylodynamic analysis

Pavel Sagulenko et al.

VIRUS EVOLUTION (2018)

Article Microbiology

Laboratory-Acquired Infection with Salmonella enterica Serovar Typhimurium Exposed by Whole-Genome Sequencing

David C. Alexander et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2016)

Article Multidisciplinary Sciences

Identification of Salmonella for public health surveillance using whole genome sequencing

Philip M. Ashton et al.

PEERJ (2016)

Article Microbiology

The Reemergent 1977 H1N1 Strain and the Gain-of-Function Debate

Michelle Rozo et al.

Article Multidisciplinary Sciences

Transient Darwinian selection in Salmonella enterica serovar Paratyphi A during 450 years of global spread of enteric fever

Zhemin Zhou et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Biotechnology & Applied Microbiology

Salmonella enterica Diversity in Central Californian Coastal Waterways

Sarah P. Walters et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)

Letter Biotechnology & Applied Microbiology

Read and assembly metrics inconsequential for clinical utility of whole-genome sequencing in mapping outbreaks

Simon R. Harris et al.

NATURE BIOTECHNOLOGY (2013)

Article Multidisciplinary Sciences

Transforming Microbial Genotyping: A Robotic Pipeline for Genotyping Bacterial Strains

Brian O'Farrell et al.

PLOS ONE (2012)

Review Plant Sciences

Plants as alternative hosts for Salmonella

Adam Schikora et al.

TRENDS IN PLANT SCIENCE (2012)

Article Computer Science, Software Engineering

D3: Data-Driven Documents

Michael Bostock et al.

IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS (2011)

Article Biotechnology & Applied Microbiology

Influence of environmental factors and human activity on the presence of Salmonella serovars in a marine environment

J Martinez-Urtaza et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)

Article Biotechnology & Applied Microbiology

Diversity of phage types among archived cultures of the demerec collection of Salmonella enterica serovar Typhimurium strains

W Rabsch et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)

Article Genetics & Heredity

Bile-induced DNA damage in Salmonella enterica

AI Prieto et al.

GENETICS (2004)