Related references
Note: Only part of the references are listed.Characterization of the rumen microbiota and its relationship with residual feed intake in sheep
Y. K. Zhang et al.
ANIMAL (2021)
kernInt: A Kernel Framework for Integrating Supervised and Unsupervised Analyses in Spatio-Temporal Metagenomic Datasets
Elies Ramon et al.
FRONTIERS IN MICROBIOLOGY (2021)
A gene co-association network regulating gut microbial communities in a Duroc pig population
Antonio Reverter et al.
MICROBIOME (2021)
Dynamic distribution of gut microbiota in meat rabbits at different growth stages and relationship with average daily gain (ADG)
Shaoming Fang et al.
BMC MICROBIOLOGY (2020)
Residual feed intake divergence during the preweaning period is associated with unique hindgut microbiome and metabolome profiles in neonatal Holstein heifer calves
Ahmed Elolimy et al.
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2020)
Genome-wide association study for feed efficiency in collective cage-raised rabbits under full and restricted feeding
J. P. Sanchez et al.
ANIMAL GENETICS (2020)
Effects of Gut Microbiome and Short-Chain Fatty Acids (SCFAs) on Finishing Weight of Meat Rabbits
Shaoming Fang et al.
FRONTIERS IN MICROBIOLOGY (2020)
To resist and persist: Important factors in the pathogenesis of Bacteroides fragilis
Mina Yekani et al.
MICROBIAL PATHOGENESIS (2020)
Breeding farm, level of feeding and presence of antibiotics in the feed influence rabbit cecal microbiota
Maria Velasco-Galilea et al.
ANIMAL MICROBIOME (2020)
Sequence and cultivation study of Muribaculaceae reveals novel species, host preference, and functional potential of this yet undescribed family
Ilias Lagkouvardos et al.
MICROBIOME (2019)
Use of group records of feed intake to select for feed efficiency in rabbit
Miriam Piles et al.
JOURNAL OF ANIMAL BREEDING AND GENETICS (2019)
Predicting Growth and Carcass Traits in Swine Using Microbiome Data and Machine Learning Algorithms
Christian Maltecca et al.
SCIENTIFIC REPORTS (2019)
Whole rumen metagenome sequencing allows classifying and predicting feed efficiency and intake levels in cattle
Beatriz Delgado et al.
SCIENTIFIC REPORTS (2019)
Body size phenotypes comprehensively assess cardiometabolic risk and refine the association between obesity and gut microbiota
J. de la Cuesta-Zuluaga et al.
INTERNATIONAL JOURNAL OF OBESITY (2018)
Effects of spray-dried porcine plasma on fecal microbiota in nursery pigs
Huyen Tran et al.
JOURNAL OF ANIMAL SCIENCE (2018)
Exploratory Analysis of the Microbiological Potential for Efficient Utilization of Fiber Between Lantang and Duroc Pigs
Penghui Cheng et al.
FRONTIERS IN MICROBIOLOGY (2018)
Host contributes to longitudinal diversity of fecal microbiota in swine selected for lean growth
Duc Lu et al.
MICROBIOME (2018)
Effects of host genetics and environmental conditions on fecal microbiota composition of pigs
Tereza Kubasova et al.
PLOS ONE (2018)
Characterization of bacterial microbiota compositions along the intestinal tract in pigs and their interactions and functions
Daniel Crespo-Piazuelo et al.
SCIENTIFIC REPORTS (2018)
The underlying microbial mechanism of epizootic rabbit enteropathy triggered by a low fiber diet
Ding Xing Jin et al.
SCIENTIFIC REPORTS (2018)
Rabbit Microbiota Changes Throughout the Intestinal Tract
Maria Velasco-Galilea et al.
FRONTIERS IN MICROBIOLOGY (2018)
Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows
Gareth Frank Difford et al.
PLOS GENETICS (2018)
Host Genome Influence on Gut Microbial Composition and Microbial Prediction of Complex Traits in Pigs
Amelia Camarinha-Silva et al.
GENETICS (2017)
Intestinal microbiota profiles associated with low and high residual feed intake in chickens across two geographical locations
Sina-Catherine Siegerstetter et al.
PLOS ONE (2017)
Diet and feed efficiency status affect rumen microbial profiles of sheep
M. J. Ellison et al.
SMALL RUMINANT RESEARCH (2017)
Heritable Bovine Rumen Bacteria Are Phylogenetically Related and Correlated with the Cow's Capacity To Harvest Energy from Its Feed
Goor Sasson et al.
MBIO (2017)
Host Genome Influence on Gut Microbial Composition and Microbial Prediction of Complex Traits in Pigs
Amelia Camarinha-Silva et al.
GENETICS (2017)
Plane of nutrition affects the phylogenetic diversity and relative abundance of transcriptionally active methanogens in the bovine rumen
Emily McGovern et al.
SCIENTIFIC REPORTS (2017)
Metatranscriptomic Profiling Reveals Linkages between the Active Rumen Microbiome and Feed Efficiency in Beef Cattle
Fuyong Li et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2017)
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
Alma E. Parada et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Genetic Determinants of the Gut Microbiome in UK Twins
Julia K. Goodrich et al.
CELL HOST & MICROBE (2016)
Specific microbiome-dependent mechanisms underlie the energy harvest efficiency of ruminants
Sheerli Kruger Ben Shabat et al.
ISME JOURNAL (2016)
Direct and correlated responses to selection in two lines of rabbits selected for feed efficiency under ad libitum and restricted feeding: I. Production traits and gut microbiota characteristics
L. Drouilhet et al.
JOURNAL OF ANIMAL SCIENCE (2016)
Ultrastructural Characterization of the Lower Motor System in a Mouse Model of Krabbe Disease
Valentina Cappello et al.
SCIENTIFIC REPORTS (2016)
Early-life establishment of the swine gut microbiome and impact on host phenotypes
Nuria Mach et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2015)
Illumina MiSeq Phylogenetic Amplicon Sequencing Shows a Large Reduction of an Uncharacterised Succinivibrionaceae and an Increase of the Methanobrevibacter gottschalkii Clade in Feed Restricted Cattle
Matthew Sean McCabe et al.
PLOS ONE (2015)
Human Genetics Shape the Gut Microbiome
Julia K. Goodrich et al.
CELL (2014)
ECONOMIC WEIGHTS IN RABBIT MEAT PRODUCTION
L. Cartuche et al.
WORLD RABBIT SCIENCE (2014)
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
Jai Ram Rideout et al.
PEERJ (2014)
Differential abundance analysis for microbial marker-gene surveys
Joseph N. Paulson et al.
NATURE METHODS (2013)
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
Paul J. McMurdie et al.
PLOS ONE (2013)
Metagenomic Predictions: From Microbiome to Complex Health and Environmental Phenotypes in Humans and Cattle
Elizabeth M. Ross et al.
PLOS ONE (2013)
Feed intake limitation strategies for the growing rabbit: effect on feeding behaviour, welfare, performance, digestive physiology and health: a review
T. Gidenne et al.
ANIMAL (2012)
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
Daniel McDonald et al.
ISME JOURNAL (2012)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Molecular profiling and identification of methanogenic archaeal species from rabbit caecum
Darja Kusar et al.
FEMS MICROBIOLOGY ECOLOGY (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
Effect of early feed restriction on performance and health status in growing rabbits slaughtered at 2 kg live-weight
Carlos Romero et al.
World Rabbit Science (2010)
Complete genome sequence of Olsenella uli type strain (VPI D76D-27C(T))
Markus Goeker et al.
STANDARDS IN GENOMIC SCIENCES (2010)
Feed restriction strategy in the growing rabbit. 2. Impact on digestive health, growth and carcass characteristics
T. Gidenne et al.
ANIMAL (2009)
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Qiong Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
UniFrac: a new phylogenetic method for comparing microbial communities
C Lozupone et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)