Related references
Note: Only part of the references are listed.Molecular and cellular dynamics of the 26S proteasome
Eri Sakata et al.
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2021)
Mechanisms of substrate recognition by the 26S proteasome
Caroline Davis et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2021)
Proteins containing ubiquitin-like (Ubl) domains not only bind to 26S proteasomes but also induce their activation
Galen A. Collins et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Understanding the 26S proteasome molecular machine from a structural and conformational dynamics perspective
Eric R. Greene et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2020)
The 26S Proteasome Utilizes a Kinetic Gateway to Prioritize Substrate Degradation
Jared A. M. Bard et al.
CELL (2019)
Breaking the chains: deubiquitylating enzyme specificity begets function
Michael J. Clague et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2019)
Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments
Glenn R. Masson et al.
NATURE METHODS (2019)
Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
Dorothee Liebschner et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2019)
Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome
Yuanchen Dong et al.
NATURE (2019)
The PRIDE database and related tools and resources in 2019: improving support for quantification data
Yasset Perez-Riverol et al.
NUCLEIC ACIDS RESEARCH (2019)
SPHIRE-crYOLO is a fast and accurate fully automated particle picker for cryo-EM
Thorsten Wagner et al.
COMMUNICATIONS BIOLOGY (2019)
MolProbity: More and better reference data for improved all-atom structure validation
Christopher J. Williams et al.
PROTEIN SCIENCE (2018)
PyContact: Rapid, Customizable, and Visual Analysis of Noncovalent Interactions in MD Simulations
Maximilian Scheurer et al.
BIOPHYSICAL JOURNAL (2018)
Tumor suppressive microRNA-124a inhibits sternness and enhances gefitinib sensitivity of non-small cell lung cancer cells by targeting ubiquitin-specific protease 14
Fei Yu et al.
CANCER LETTERS (2018)
UBIQUITIN CHAINS AS SECOND MESSENGERS
Philip Cohen
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2018)
Expanded Coverage of the 26S Proteasome Conformational Landscape Reveals Mechanisms of Peptidase Gating
Markus R. Eisele et al.
CELL REPORTS (2018)
Depletion of endogenous miRNA-378-3p increases peak cell density of CHO DP12 cells and is correlated with elevated levels of ubiquitin carboxyl-terminal hydrolase 14
Alan Costello et al.
JOURNAL OF BIOTECHNOLOGY (2018)
Substrate-engaged 26S proteasome structures reveal mechanisms for ATP-hydrolysis-driven translocation
Andres H. de la Pena et al.
SCIENCE (2018)
USP14 de-ubiquitinates vimentin and miR-320a modulates USP14 and vimentin to contribute to malignancy in gastric cancer cells
Ying Zhu et al.
ONCOTARGET (2017)
Meddling with Fate: The Proteasomal Deubiquitinating Enzymes
Stefanie A. H. de Poot et al.
JOURNAL OF MOLECULAR BIOLOGY (2017)
An AAA Motor-Driven Mechanical Switch in Rpn11 Controls Deubiquitination at the 26S Proteasome
Evan J. Worden et al.
MOLECULAR CELL (2017)
MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy
Shawn Q. Zheng et al.
NATURE METHODS (2017)
Structural insights into the functional cycle of the ATPase module of the 26S proteasome
Marc Wehmer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Computational Methodologies for Real-Space Structural Refinement of Large Macromolecular Complexes
Boon Chong Goh et al.
ANNUAL REVIEW OF BIOPHYSICS, VOL 45 (2016)
Allosteric Activation of Ubiquitin-Specific Proteases by β-Propeller Proteins UAF1 and WDR20
Heng Li et al.
MOLECULAR CELL (2016)
USP14 deubiquitinates proteasome-bound substrates that are ubiquitinated at multiple sites
Byung-Hoon Lee et al.
NATURE (2016)
An atomic structure of the human 26S proteasome
Xiuliang Huang et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2016)
Structure of the human 26S proteasome at a resolution of 3.9 Å
Andreas Schweitzer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome
Yuan Shi et al.
SCIENCE (2016)
An atomic structure of the human 26S proteasome
Xiuliang Huang et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2016)
CTFFIND4: Fast and accurate defocus estimation from electron micrographs
Alexis Rohou et al.
JOURNAL OF STRUCTURAL BIOLOGY (2015)
Ubp6 deubiquitinase controls conformational dynamics and substrate degradation of the 26S proteasome
Charlene Bashore et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)
Structural characterization of the interaction of Ubp6 with the 26S proteasome
Antje Aufderheide et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Ubp6 deubiquitinase controls conformational dynamics and substrate degradation of the 26S proteasome
Charlene Bashore et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)
Phosphorylation and activation of ubiquitin-specific protease-14 by Akt regulates the ubiquitin-proteasome system
Daichao Xu et al.
ELIFE (2015)
miR-4782-3p Inhibited Non-Small Cell Lung Cancer growth via USP14
Ning Wu et al.
CELLULAR PHYSIOLOGY AND BIOCHEMISTRY (2014)
Structure of the Rpn11-Rpn8 dimer reveals mechanisms of substrate deubiquitination during proteasomal degradation
Evan J. Worden et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2014)
Crystal structure of the proteasomal deubiquitylation module Rpn8-Rpn11
Ganesh Ramnath Pathare et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
Pia Unverdorben et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
The DUSP-Ubl domain of USP4 enhances its catalytic efficiency by promoting ubiquitin exchange
Marcello Clerici et al.
NATURE COMMUNICATIONS (2014)
MicroRNA-124 protects against focal cerebral ischemia via mechanisms involving Usp14-dependent REST degradation
Thorsten R. Doeppner et al.
ACTA NEUROPATHOLOGICA (2013)
Reconstitution of the 26S proteasome reveals functional asymmetries in its AAA plus unfoldase
Robyn Beckwith et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)
Conformational switching of the 26S proteasome enables substrate degradation
Mary E. Matyskiela et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)
Compensatory increase in USP14 activity accompanies impaired proteasomal proteolysis during aging
Subramaniam Ponnappan et al.
MECHANISMS OF AGEING AND DEVELOPMENT (2013)
RELION: Implementation of a Bayesian approach to cryo-EM structure determination
Sjors H. W. Scheres
JOURNAL OF STRUCTURAL BIOLOGY (2012)
APC/C-mediated multiple monoubiquitylation provides an alternative degradation signal for cyclin B1
Nevena V. Dimova et al.
NATURE CELL BIOLOGY (2012)
Near-atomic resolution structural model of the yeast 26S proteasome
Florian Beck et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Features and development of Coot
P. Emsley et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
Enhancement of proteasome activity by a small-molecule inhibitor of USP14
Byung-Hoon Lee et al.
NATURE (2010)
Structural Insights into the Assembly and Function of the SAGA Deubiquitinating Module
Nadine L. Samara et al.
SCIENCE (2010)
Structural Insights into the Regulatory Particle of the Proteasome from Methanocaldococcus jannaschii
Fan Zhang et al.
MOLECULAR CELL (2009)
A ubiquitin stress response induces altered proteasome composition
John Hanna et al.
CELL (2007)
Mass spectrometric characterization of the affinity-purified human 26S proteasome complex
Xiaorong Wang et al.
BIOCHEMISTRY (2007)
Amino-terminal dimerization, NRDP1-rhodanese interaction, and inhibited catalytic domain conformation of the ubiquitin-specific protease 8 (USP8)
George V. Avvakumov et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Deubiquitinating enzyme Ubp6 functions noncatalytically to delay proteasomal degradation
John Hanna et al.
CELL (2006)
Scalable molecular dynamics with NAMD
JC Phillips et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2005)
Structure and mechanisms of the proteasome-associated deubiquitinating enzyme USP14
M Hu et al.
EMBO JOURNAL (2005)
Automated electron microscope tomography using robust prediction of specimen movements
DN Mastronarde
JOURNAL OF STRUCTURAL BIOLOGY (2005)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Announcing the worldwide Protein Data Bank
H Berman et al.
NATURE STRUCTURAL BIOLOGY (2003)
Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde
M Hu et al.
CELL (2002)
PHENIX:: building new software for automated crystallographic structure determination
PD Adams et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2002)
Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome
R Verma et al.
SCIENCE (2002)
A cryptic protease couples deubiquitination and degradation by the proteasome
TT Yao et al.
NATURE (2002)
Multiple associated proteins regulate proteasome structure and function
DS Leggett et al.
MOLECULAR CELL (2002)
A novel active site-directed probe specific for deubiquitylating enzymes reveals proteasome association of USP14
A Borodovsky et al.
EMBO JOURNAL (2001)
Structural basis for the activation of 20S proteasomes by 11S regulators
FG Whitby et al.
NATURE (2000)
A gated channel into the proteasome core particle
M Groll et al.
NATURE STRUCTURAL BIOLOGY (2000)
Share Paper
