Related references
Note: Only part of the references are listed.Signal hotspot mutations in SARS-CoV-2 genomes evolve as the virus spreads and actively replicates in different parts of the world
Stefanie Weber et al.
VIRUS RESEARCH (2020)
HotSpotAnnotations-a database for hotspot mutations and annotations in cancer
Victor Trevino
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2020)
Predicting mutational routes to new adaptive phenotypes
Peter A. Lind et al.
ELIFE (2019)
Codon usage of highly expressed genes affects proteome-wide translation efficiency
Idan Frumkin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Identifying Drivers of Parallel Evolution: A Regression Model Approach
Susan F. Bailey et al.
GENOME BIOLOGY AND EVOLUTION (2018)
Synonymous mutations make dramatic contributions to fitness when growth is limited by a weak-link enzyme
JohnCarlo Kristofich et al.
PLOS GENETICS (2018)
Gene inversion potentiates bacterial evolvability and virulence
Christopher N. Merrikh et al.
NATURE COMMUNICATIONS (2018)
Parallel genetic adaptation across environments differing in mode of growth or resource availability
Caroline B. Turner et al.
EVOLUTION LETTERS (2018)
Reduced intrinsic DNA curvature leads to increased mutation rate
Chaorui Duan et al.
GENOME BIOLOGY (2018)
What drives parallel evolution? How population size and mutational variation contribute to repeated evolution
Susan F. Bailey et al.
BIOESSAYS (2017)
Mutational Biases Influence Parallel Adaptation
Arlin Stoltzfus et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
Rapid Genetic Adaptation during the First Four Months of Survival under Resource Exhaustion
Sarit Avrani et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
Mutation-Driven Parallel Evolution during Viral Adaptation
Andrew M. Sackman et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
Environment determines evolutionary trajectory in a constrained phenotypic space
David T. Fraebel et al.
ELIFE (2017)
Adaptation of Escherichia coli to Long-Term Serial Passage in Complex Medium: Evidence of Parallel Evolution
Karin E. Kram et al.
MSYSTEMS (2017)
Synergistic Pleiotropy Overrides the Costs of Complexity in Viral Adaptation
Lindsey W. McGee et al.
GENETICS (2016)
Beyond the Hypercube: Evolutionary Accessibility of Fitness Landscapes with Realistic Mutational Networks
Marcin Zagorski et al.
PLOS COMPUTATIONAL BIOLOGY (2016)
Generation of mutation hotspots in ageing bacterial colonies
Agnieszka Sekowska et al.
SCIENTIFIC REPORTS (2016)
CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community
Thomas R. Connor et al.
MICROBIAL GENOMICS (2016)
Genomic investigations of evolutionary dynamics and epistasis in microbial evolution experiments
Elizabeth R. Jerison et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2015)
The Effect of Selection Environment on the Probability of Parallel Evolution
Susan F. Bailey et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Precision-engineering the Pseudomonas aeruginosa genome with two-step allelic exchange
Laura R. Hmelo et al.
NATURE PROTOCOLS (2015)
Contribution of a mutational hot spot to hemoglobin adaptation in high-altitude Andean house wrens
Spencer C. Galen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Evolutionary resurrection of flagellar motility via rewiring of the nitrogen regulation system
Tiffany B. Taylor et al.
SCIENCE (2015)
Experimental evolution reveals hidden diversity in evolutionary pathways
Peter A. Lind et al.
ELIFE (2015)
Mutation Rate, Spectrum, Topology, and Context-Dependency in the DNA Mismatch Repair-Deficient Pseudomonas fluorescens ATCC948
Hongan Long et al.
GENOME BIOLOGY AND EVOLUTION (2015)
The biosurfactant viscosin produced by Pseudomonas fluorescens SBW25 aids spreading motility and plant growth promotion
Abdullah S. Alsohim et al.
ENVIRONMENTAL MICROBIOLOGY (2014)
Testing the Role of Genetic Background in Parallel Evolution Using the Comparative Experimental Evolution of Antibiotic Resistance
Tom Vogwill et al.
MOLECULAR BIOLOGY AND EVOLUTION (2014)
Adaptation of Enterococcus faecalis to Daptomycin Reveals an Ordered Progression to Resistance
Corwin Miller et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2013)
Pleiotropic Effects of GacA on Pseudomonas fluorescens Pf0-1 In Vitro and in Soil
Sarah C. Seaton et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Convergent Evolution of Hyperswarming Leads to Impaired Biofilm Formation in Pathogenic Bacteria
Dave van Ditmarsch et al.
CELL REPORTS (2013)
Parallel Evolutionary Dynamics of Adaptive Diversification in Escherichia coli
Matthew D. Herron et al.
PLOS BIOLOGY (2013)
Genomic analysis of a key innovation in an experimental Escherichia coli population
Zachary D. Blount et al.
NATURE (2012)
The Molecular Diversity of Adaptive Convergence
Olivier Tenaillon et al.
SCIENCE (2012)
Repeatability and Contingency in the Evolution of a Key Innovation in Phage Lambda
Justin R. Meyer et al.
SCIENCE (2012)
Parallel evolution of domesticated Caenorhabditis species targets pheromone receptor genes
Patrick T. McGrath et al.
NATURE (2011)
Overlap extension PCR cloning: a simple and reliable way to create recombinant plasmids
Anton V. Bryksin et al.
BIOTECHNIQUES (2010)
Adaptive Divergence in Experimental Populations of Pseudomonas fluorescens. IV. Genetic Constraints Guide Evolutionary Trajectories in a Parallel Adaptive Radiation
Michael J. McDonald et al.
GENETICS (2009)
Coding-Sequence Determinants of Gene Expression in Escherichia coli
Grzegorz Kudla et al.
SCIENCE (2009)
Whole-genome mutational biases in bacteria
Peter A. Lind et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
The genetic basis of parallel and divergent phenotypic responses in evolving populations of Escherichia coli
Elizabeth A. Ostrowski et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)
The distribution of beneficial mutant effects under strong selection
Rowan D. H. Barrett et al.
GENETICS (2006)
Tests of parallel molecular evolution in a long-term experiment with Escherichia coli
Robert Woods et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Darwinian evolution can follow only very few mutational paths to fitter proteins
DM Weinreich et al.
SCIENCE (2006)
Soft sweeps: Molecular population genetics of adaptation from standing genetic variation
J Hermisson et al.
GENETICS (2005)
Parallel genotypic adaptation: when evolution repeats itself
TE Wood et al.
GENETICA (2005)
Predicting mutation frequencies in stem-loop structures of derepressed genes: implications for evolution
BE Wright et al.
MOLECULAR MICROBIOLOGY (2003)
Genetic analysis of the AdnA regulon in Pseudomonas fluorescens: Nonessential role of flagella in adhesion to sand and biofilm formation
EA Robleto et al.
JOURNAL OF BACTERIOLOGY (2003)
Secondary structure prediction and structure-specific sequence analysis of single-stranded DNA
F Dong et al.
NUCLEIC ACIDS RESEARCH (2001)
Share Paper
