Related references
Note: Only part of the references are listed.Spatial patterns in phage-Rhizobium coevolutionary interactions across regions of common bean domestication
Jannick Van Cauwenberghe et al.
ISME JOURNAL (2021)
Molecular Evolutionary Genetics Analysis (MEGA) for macOS
Glen Stecher et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
Clades of huge phages from across Earth's ecosystems
Basem Al-Shayeb et al.
NATURE (2020)
VIBRANT: automated recovery, annotation and curation of microbial viruses, and evaluation of viral community function from genomic sequences
Kristopher Kieft et al.
MICROBIOME (2020)
Bacterial 'Grounded' Prophages: Hotspots for Genetic Renovation and Innovation
Bhaskar Chandra Mohan Ramisetty et al.
FRONTIERS IN GENETICS (2019)
Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
Ho Bin Jang et al.
NATURE BIOTECHNOLOGY (2019)
Phylogenomic Rhizobium Species Are Structured by a Continuum of Diversity and Genomic Clusters
Victor Gonzalez et al.
FRONTIERS IN MICROBIOLOGY (2019)
Machine-Learning Classification Suggests That Many Alphaproteobacterial Prophages May Instead Be Gene Transfer Agents
Roman Kogay et al.
GENOME BIOLOGY AND EVOLUTION (2019)
Phage-inducible chromosomal islands are ubiquitous within the bacterial universe
Alfred Fillol-Salom et al.
ISME JOURNAL (2018)
The impact of bacteriophages on phyllosphere bacterial abundance and composition
Norma M. Morella et al.
MOLECULAR ECOLOGY (2018)
Biological species in the viral world
Louis-Marie Bobay et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Investigation of recombination-intense viral groups and their genes in the Earth's virome
Jan P. Meier-Kolthoff et al.
SCIENTIFIC REPORTS (2018)
Prokaryotic Virus Orthologous Groups (pVOGs): a resource for comparative genomics and protein family annotation
Ana Laura Grazziotin et al.
NUCLEIC ACIDS RESEARCH (2017)
Lysogeny in nature: mechanisms, impact and ecology of temperate phages
Cristina Howard-Varona et al.
ISME JOURNAL (2017)
Virus taxonomy in the age of metagenomics
Peter Simmonds et al.
NATURE REVIEWS MICROBIOLOGY (2017)
Ecological and Evolutionary Benefits of Temperate Phage: What Does or Doesn't Kill You Makes You Stronger
Ellie Harrison et al.
BIOESSAYS (2017)
ViPTree: the viral proteomic tree server
Yosuke Nishimura et al.
BIOINFORMATICS (2017)
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
Simon Roux et al.
NATURE (2016)
The Significance of Mutualistic Phages for bacterial Ecology and Evolution
Nancy Obeng et al.
TRENDS IN MICROBIOLOGY (2016)
Genomic and phenotypic characterization of Rhizobium gallicum phage vB_RgIS_P106B
Anupama P. Halmillawewa et al.
MICROBIOLOGY-SGM (2015)
Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Welkin H. Pope et al.
ELIFE (2015)
The Phage-Inducible Chromosomal Islands: A Family of Highly Evolved Molecular Parasites
Jose R. Penades et al.
ANNUAL REVIEW OF VIROLOGY, VOL 2 (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Welkin H. Pope et al.
ELIFE (2015)
Narrow-Host-Range Bacteriophages That Infect Rhizobium etli Associate with Distinct Genomic Types
Rosa Isela Santamaria et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
Rhizobium azibense sp nov., a nitrogen fixing bacterium isolated from root-nodules of Phaseolus vulgaris
Bacem Mnasri et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Viral tagging reveals discrete populations in Synechococcus viral genome sequence space
Li Deng et al.
NATURE (2014)
Pervasive domestication of defective prophages by bacteria
Louis-Marie Bobay et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Defining viral species: making taxonomy useful
A. Townsend Peterson
VIROLOGY JOURNAL (2014)
The Adaptation of Temperate Bacteriophages to Their Host Genomes
Louis-Marie Bobay et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Gene transfer agents: phage-like elements of genetic exchange
Andrew S. Lang et al.
NATURE REVIEWS MICROBIOLOGY (2012)
Easyfig: a genome comparison visualizer
Mitchell J. Sullivan et al.
BIOINFORMATICS (2011)
Mycobacteriophages: Genes and Genomes
Graham F. Hatfull
ANNUAL REVIEW OF MICROBIOLOGY, VOL 64, 2010 (2010)
Comparative Genomic Analysis of 60 Mycobacteriophage Genomes: Genome Clustering, Gene Acquisition, and Gene Size
Graham F. Hatfull et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
Cryptic prophages help bacteria cope with adverse environments
Xiaoxue Wang et al.
NATURE COMMUNICATIONS (2010)
Unifying classical and molecular taxonomic classification:: analysis of the Podoviridae using BLASTP-based tools
Rob Lavigne et al.
RESEARCH IN MICROBIOLOGY (2008)
Key role of selective viral-induced mortality in determining marine bacterial community composition
T. Bouvier et al.
ENVIRONMENTAL MICROBIOLOGY (2007)
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
RC Edgar
BMC BIOINFORMATICS (2004)
The impact of prophages on bacterial chromosomes
C Canchaya et al.
MOLECULAR MICROBIOLOGY (2004)
Prophage genomics
C Canchaya et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2003)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
Share Paper
