Related references
Note: Only part of the references are listed.Structure of the mycobacterial ESX-5 type VII secretion system pore complex
Katherine S. H. Beckham et al.
SCIENCE ADVANCES (2021)
Integrative Modelling of Biomolecular Complexes
P. Koukos et al.
JOURNAL OF MOLECULAR BIOLOGY (2020)
Structural Modeling Using Solution Small-Angle X-ray Scattering (SAXS)
Tobias W. Graewert et al.
JOURNAL OF MOLECULAR BIOLOGY (2020)
SciPy 1.0: fundamental algorithms for scientific computing in Python
Pauli Virtanen et al.
NATURE METHODS (2020)
Preparing samples from whole cells using focused-ion-beam milling for cryo-electron tomography
Felix R. Wagner et al.
NATURE PROTOCOLS (2020)
In-cell architecture of an actively transcribing-translating expressome
Francis J. O'Reilly et al.
SCIENCE (2020)
The promise and the challenges of cryo-electron tomography
Martin Turk et al.
FEBS LETTERS (2020)
In-cell architecture of the nuclear pore and snapshots of its turnover
Matteo Allegretti et al.
NATURE (2020)
Array programming with NumPy
Charles R. Harris et al.
NATURE (2020)
Cryo-electron tomography structure of Arp2/3 complex in cells reveals new insights into the branch junction
Florian Fassler et al.
NATURE COMMUNICATIONS (2020)
Integrative Structure Modeling: Overview and Assessment
Merav Braitbard et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 88 (2019)
Challenges and opportunities in cryo-EM single-particle analysis
Dmitry Lyumkis
JOURNAL OF BIOLOGICAL CHEMISTRY (2019)
Principles for Integrative Structural Biology Studies
Michael P. Rout et al.
CELL (2019)
Molecular basis of tRNA recognition by the Elongator complex
Maria Dauden et al.
SCIENCE ADVANCES (2019)
Modelling structures in cryo-EM maps
Sony Malhotra et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2019)
Structural asymmetry in the eukaryotic Elongator complex
Maria I. Dauden et al.
FEBS LETTERS (2018)
Integrative structure modeling with the Integrative Modeling Platform
Benjamin Webb et al.
PROTEIN SCIENCE (2018)
Structural prediction of protein models using distance restraints derived from cross-linking mass spectrometry data
Zsuzsanna Orban-Nemeth et al.
NATURE PROTOCOLS (2018)
Structure of paused transcription complex Pol II-DSIF-NELF
Seychelle M. Vos et al.
NATURE (2018)
Integrative structure and functional anatomy of a nuclear pore complex
Seung Joong Kim et al.
NATURE (2018)
Structure of human TFIID and mechanism of TBP loading onto promoter DNA
Avinash B. Patel et al.
SCIENCE (2018)
Architecture of the yeast Elongator complex
Maria I. Dauden et al.
EMBO REPORTS (2017)
The nuclear pore complex: understanding its function through structural insight
Martin Beck et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)
Assessing Exhaustiveness of Stochastic Sampling for Integrative Modeling of Macromolecular Structures
Shruthi Viswanath et al.
BIOPHYSICAL JOURNAL (2017)
Automated structure modeling of large protein assemblies using crosslinks as distance restraints
Mathias Ferber et al.
NATURE METHODS (2016)
Resolving macromolecular structures from electron cryo-tomography data using subtomogram averaging in RELION
Tanmay A. M. Bharat et al.
NATURE PROTOCOLS (2016)
Architecture of the symmetric core of the nuclear pore
Daniel H. Lin et al.
SCIENCE (2016)
Molecular architecture of the inner ring scaffold of the human nuclear pore complex
Jan Kosinski et al.
SCIENCE (2016)
Cryo-Electron Tomography: Can it Reveal the Molecular Sociology of Cells in Atomic Detail?
Martin Beck et al.
TRENDS IN CELL BIOLOGY (2016)
Structure, Dynamics, Assembly, and Evolution of Protein Complexes
Joseph A. Marsh et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 84 (2015)
Xlink Analyzer: Software for analysis and visualization of cross-linking data in the context of three-dimensional structures
Jan Kosinski et al.
JOURNAL OF STRUCTURAL BIOLOGY (2015)
γ-TEMPy: Simultaneous Fitting of Components in 3D-EM Maps of Their Assembly Using a Genetic Algorithm
Arun Prasad Pandurangan et al.
STRUCTURE (2015)
Equilibrium Sampling Approach to the Interpretation of Electron Density Maps
Andreas Vitalis et al.
STRUCTURE (2014)
pyRMSD: a Python package for efficient pairwise RMSD matrix calculation and handling
Victor A. Gil et al.
BIOINFORMATICS (2013)
Integrated Structural Analysis of the Human Nuclear Pore Complex Scaffold
Khanh Huy Bui et al.
CELL (2013)
iMODFIT: Efficient and robust flexible fitting based on vibrational analysis in internal coordinates
Jose Ramon Lopez-Blanco et al.
JOURNAL OF STRUCTURAL BIOLOGY (2013)
Conventions and workflows for using Situs
Willy Wriggers
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2012)
FOLD-EM: automated fold recognition in medium- and low-resolution (4-15 A) electron density maps
Mitul Saha et al.
BIOINFORMATICS (2012)
ATTRACT-EM: A New Method for the Computational Assembly of Large Molecular Machines Using Cryo-EM Maps
Sjoerd J. de Vries et al.
PLOS ONE (2012)
Putting the Pieces Together: Integrative Modeling Platform Software for Structure Determination of Macromolecular Assemblies
Daniel Russel et al.
PLOS BIOLOGY (2012)
Head swivel on the ribosome facilitates translocation by means of intra-subunit tRNA hybrid sites
Andreas H. Ratje et al.
NATURE (2010)
FoXS: a web server for rapid computation and fitting of SAXS profiles
Dina Schneidman-Duhovny et al.
NUCLEIC ACIDS RESEARCH (2010)
Inferential Optimization for Simultaneous Fitting of Multiple Components into a CryoEM Map of Their Assembly
Keren Lasker et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Refinement of Protein Structures into Low-Resolution Density Maps Using Rosetta
Frank DiMaio et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Protein structure homology modeling using SWISS-MODEL workspace
Lorenza Bordoli et al.
NATURE PROTOCOLS (2009)
fdrtool: a versatile R package for estimating local and tail area-based false discovery rates
Korbinian Strimmer
BIOINFORMATICS (2008)
Protein structure fitting and refinement guided by cryo-EM density
Maya Topf et al.
STRUCTURE (2008)
Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics
Leonardo G. Trabuco et al.
STRUCTURE (2008)
The MARTINI force field: Coarse grained model for biomolecular simulations
Siewert J. Marrink et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2007)
A general amphipathic α-helical motif for sensing membrane curvature
Guillaume Drin et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2007)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
HADDOCK: A protein-protein docking approach based on biochemical or biophysical information
C Dominguez et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)
Share Paper
