4.8 Article

Imaging intact human organs with local resolution of cellular structures using hierarchical phase-contrast tomography

Journal

NATURE METHODS
Volume 18, Issue 12, Pages 1532-+

Publisher

NATURE PORTFOLIO
DOI: 10.1038/s41592-021-01317-x

Keywords

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Funding

  1. Chan Zuckerberg Initiative DAF [2020-225394]
  2. fund of the Silicon Valley Community Foundation
  3. ESRF [md1252]
  4. Royal Academy of Engineering [CiET1819/10]
  5. MRC [MR/R025673/1]
  6. MRC Skills Development fellowship [MR/S007687/1]
  7. Kidney Research UK [Paed_RP_10_2018, IN_012_2019]
  8. Rosetrees Trust [PGS19-2/10174, PhD2020\100012]
  9. Wellcome Trust Investigator Award in Science [220895/Z/20/Z]
  10. UCL MB/PhD program
  11. Child Health Research PhD studentship
  12. National Institute for Health Research Great Ormond Street Hospital Biomedical Research Centre
  13. European Consolidator grant
  14. XHale [771883]
  15. Deutsche Forschungsgemeinschaft [KFO311]
  16. National Institutes of Health [HL94567, HL134229]
  17. Wellcome Trust Clinical Research Career Development fellowship [209553/Z/17/Z]
  18. National Institute for Health Research University College London Hospital Biomedical Research Centre
  19. German Registry of COVID-19 Autopsies (DeRegCOVID - Federal Ministry of Health) [ZMVI1-2520COR201]
  20. Federal Ministry of Education and Research, Network of University Medicine (DEFEAT PANDEMIcs) [01KX2021]
  21. Wellcome Trust [220895/Z/20/Z, 209553/Z/17/Z]
  22. MRC [MR/S007687/1, MR/R025673/1] Funding Source: UKRI
  23. Wellcome Trust [220895/Z/20/Z] Funding Source: Wellcome Trust

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Hierarchical phase-contrast tomography (HiP-CT) allows for multiscale imaging of intact human organs, providing insights into organ structures and cellular details. It offers multi-resolution imaging of organotypic functional units and individual specialized cells within intact human organs.
Hierarchical phase-contrast tomography (HiP-CT) enables multiscale imaging of any region within an intact human organ down to cellular resolution. HiP-CT of five organ types revealed 3D morphological features in healthy and diseased tissue. Imaging intact human organs from the organ to the cellular scale in three dimensions is a goal of biomedical imaging. To meet this challenge, we developed hierarchical phase-contrast tomography (HiP-CT), an X-ray phase propagation technique using the European Synchrotron Radiation Facility (ESRF)'s Extremely Brilliant Source (EBS). The spatial coherence of the ESRF-EBS combined with our beamline equipment, sample preparation and scanning developments enabled us to perform non-destructive, three-dimensional (3D) scans with hierarchically increasing resolution at any location in whole human organs. We applied HiP-CT to image five intact human organ types: brain, lung, heart, kidney and spleen. HiP-CT provided a structural overview of each whole organ followed by multiple higher-resolution volumes of interest, capturing organotypic functional units and certain individual specialized cells within intact human organs. We demonstrate the potential applications of HiP-CT through quantification and morphometry of glomeruli in an intact human kidney and identification of regional changes in the tissue architecture in a lung from a deceased donor with coronavirus disease 2019 (COVID-19).

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