4.8 Article

Non-syntrophic methanogenic hydrocarbon degradation by an archaeal species

Journal

NATURE
Volume 601, Issue 7892, Pages 257-+

Publisher

NATURE PORTFOLIO
DOI: 10.1038/s41586-021-04235-2

Keywords

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Funding

  1. National Natural Science Foundation of China [92051108, 91851105, 41802179, 31970066, 31570009, 31970105]
  2. Agricultural Science and Technology Innovation Project of the Chinese Academy of Agriculture Science [CAAS-ASTIP-2016-BIOMA]
  3. Innovation Team Project of Universities in Guangdong Province [2020KCXTD023]
  4. Shenzhen Science and Technology Program [JCYJ20200109105010363]
  5. Fundamental Research Funds for the Central Universities [LZUJBKY-2021-KB16]
  6. Central Public-interest Scientific Institution Basal Research Fund [Y2021PT02, Y2021XK06]
  7. Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy via Excellence Chair Victoria Orphan [EXC-2077-390741603]
  8. DFG [EXC-2077-390741603]
  9. Max Planck Society

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Recent studies have shown that the archaeon 'Candidatus Methanoliparum' can independently degrade long-chain hydrocarbons and produce methane. This alkylotrophic methanogen is widely distributed in oil-rich environments and may play a crucial role in transforming hydrocarbons into methane.
The methanogenic degradation of oil hydrocarbons can proceed through syntrophic partnerships of hydrocarbon-degrading bacteria and methanogenic archaea(1-3). However, recent culture-independent studies have suggested that the archaeon 'Candidatus Methanoliparum' alone can combine the degradation of long-chain alkanes with methanogenesis(4,5). Here we cultured Ca. Methanoliparum from a subsurface oil reservoir. Molecular analyses revealed that Ca. Methanoliparum contains and overexpresses genes encoding alkyl-coenzyme M reductases and methyl-coenzyme M reductases, the marker genes for archaeal multicarbon alkane and methane metabolism. Incubation experiments with different substrates and mass spectrometric detection of coenzyme-M-bound intermediates confirm that Ca. Methanoliparum thrives not only on a variety of long-chain alkanes, but also on n-alkylcyclohexanes and n-alkylbenzenes with long n-alkyl (C->= 13) moieties. By contrast, short-chain alkanes (such as ethane to octane) or aromatics with short alkyl chains (C-<= 12) were not consumed. The wide distribution of Ca. Methanoliparum(4-6) in oil-rich environments indicates that this alkylotrophic methanogen may have a crucial role in the transformation of hydrocarbons into methane.

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