Mechanistically Guided Workflow for Relating Complex Reactive Site Topologies to Catalyst Performance in C-H Functionalization Reactions

Leveraging congested catalyst scaffolds has emerged as a key strategy for altering innate substrate site-selectivity profiles in C-H functionalization reactions. Similar to enzyme active sites, optimal small molecule catalysts often feature reactive cavities tailored for controlling substrate approach trajectories. However, relating three-dimensional catalyst shape to reaction output remains a formidable challenge, in part due to the lack of molecular features capable of succinctly describing complex reactive site topologies in terms of numerical inputs for machine learning applications. Herein, we present a new set of descriptors, Spatial Molding for Approachable Rigid Targets (SMART), which we have applied to quantify reactive site spatial constraints for an expansive library of dirhodium catalysts and to predict site-selectivity for C-H functionalization of 1-bromo-4-pentylbenzene via donor/acceptor carbene intermediates. Optimal site-selectivity for the terminal methylene position was obtained with Rh-2(S-2-Cl-5-MesTPCP)(4) (30.9:1 rr, 14:1 dr, 87% ee), while C-H functionalization at the electronically activated benzylic site was increasingly favored for Rh-2(TPCP)(4) catalysts lacking an ortho-CI, Rh-2(S-PTAD)(4), and Rh-2(S-TCPTAD)(4), respectively. Intuitive global site-selectivity models for 25 disparate dirhodium catalysts were developed via multivariate linear regression to explicitly assess the contributing roles of steric congestion and dirhodium-carbene electrophilicity in controlling the site of C-H functionalization. The workflow utilizes spatial classification to extract descriptors only for reactive catalyst conformers, a nuance that may be widely applicable for establishing close correspondence between ground-state model systems and transition states. Broader still, SMART descriptors are amenable for delineating salient reactive site features to predict reactivity in other chemical and biological contexts.

Automated summary

Leveraging congested catalyst scaffolds is a key strategy for altering substrate site-selectivity in C-H functionalization reactions. In this study, a new set of descriptors (SMART) was developed to quantify reactive site spatial constraints for a library of dirhodium catalysts and predict site-selectivity for C-H functionalization reactions. The study also developed global site-selectivity models to assess the roles of steric congestion and dirhodium-carbene electrophilicity in controlling the site of C-H functionalization.