Related references
Note: Only part of the references are listed.Responses of bacterial communities in wheat rhizospheres in different soils to di-n-butyl and di(2-ethylhexyl)phthalate contamination
Minling Gao et al.
GEODERMA (2020)
List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
Aidan C. Parte et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2020)
Salt in stools is associated with obesity, gut halophilic microbiota and Akkermansia muciniphila depletion in humans
E. H. Seck et al.
INTERNATIONAL JOURNAL OF OBESITY (2019)
Lentibacillus lipolyticus sp. nov., a moderately halophilic bacterium isolated from shrimp paste (Ka-pi)
Auttaporn Booncharoen et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2019)
OrthoFinder: phylogenetic orthology inference for comparative genomics
David M. Emms et al.
GENOME BIOLOGY (2019)
Diversity of Bacillus-like bacterial community in the rhizospheric and non-rhizospheric soil of halophytes (Salsola stocksii and Atriplex amnicola), and characterization of osmoregulatory genes in halophilic Bacilli
Salma Mukhtar et al.
CANADIAN JOURNAL OF MICROBIOLOGY (2018)
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
Jongsik Chun et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2018)
Bacilli community of saline-alkaline soils from the Ararat Plain (Armenia) assessed by molecular and culture-based methods
Hovik Panosyan et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2018)
Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
Seok-Hwan Yoon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2017)
Diversity of Bacillus-like bacterial community in the sediments of the Bamenwan mangrove wetland in Hainan, China
Min Liu et al.
CANADIAN JOURNAL OF MICROBIOLOGY (2017)
AfterQC: automatic filtering, trimming, error removing and quality control for fastq data
Shifu Chen et al.
BMC BIOINFORMATICS (2017)
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison
Michael Richter et al.
BIOINFORMATICS (2016)
Halobacillus salicampi sp nov., a moderately halophilic bacterium isolated from a solar saltern sediment
Su-Jin Kim et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2016)
OrthoANI: An improved algorithm and software for calculating average nucleotide identity
Imchang Lee et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Donovan H. Parks et al.
GENOME RESEARCH (2015)
Halobacillus andaensis sp nov., a moderately halophilic bacterium isolated from saline and alkaline soil
Kaibiao Wang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2015)
Halobacillus sediminis sp nov., a moderately halophilic bacterium isolated from a solar saltern sediment
Su-Jin Kim et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2015)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Homeostasis and Catabolism of Choline and Glycine Betaine: Lessons from Pseudomonas aeruginosa
Matthew J. Wargo
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Genome sequence-based species delimitation with confidence intervals and improved distance functions
Jan P. Meier-Kolthoff et al.
BMC BIOINFORMATICS (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Sequencing quality assessment tools to enable data-driven informatics for high throughput genomics
Richard M. Leggett et al.
Frontiers in Genetics (2013)
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
Anton Bankevich et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2012)
Halobacillus naozhouensis sp nov., a moderately halophilic bacterium isolated from a sea anemone
Yi-Guang Chen et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2009)
Structure, function and biosynthesis of carotenoids in the moderately halophilic bacterium Halobacillus halophilus
Saskia Koecher et al.
ARCHIVES OF MICROBIOLOGY (2009)
Halobacillus salsuginis sp nov., a moderately halophilic bacterium from a subterranean brine
Yi-Guang Chen et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Proposed minimal standards for describing new taxa of aerobic, endospore-forming bacteria
N. A. Logan et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
Morgan N. Price et al.
MOLECULAR BIOLOGY AND EVOLUTION (2009)
Shifting the genomic gold standard for the prokaryotic species definition
Michael Richter et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
The RAST server: Rapid annotations using subsystems technology
Ramy K. Aziz et al.
BMC GENOMICS (2008)
Halobacillus mangrovi sp nov., a moderately halophilic bacterium isolated from the black mangrove Avicennia germinans
Nelis Soto-Ramirez et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Halobacillus seohaensis sp nov., isolated from a marine solar saltern in Korea
Jung-Hoon Yoon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Halobacillus alkaliphilus sp nov., a halophilic bacterium isolated from a salt lake in Fuente de Piedra, southern Spain
Ida Romano et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Halobacillus faecis sp nov., a spore-forming bacterium isolated from a mangrove area on Ishigaki Island, Japan
Sun-Young An et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Halobacillus campisalis sp nov., containing diaminopimelic acid in the cell-wall peptidoglycan, and emended description of the genus Halobacillus
Jung-Hoon Yoon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Halobacillus profundi sp nov and Halobacillus kuroshimensis sp nov., moderately halophilic bacteria isolated from a deep-sea methane cold seep
Ngoc-Phuc Hua et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
Johan Goris et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Halobacillus yeomjeoni sp nov., isolated from a marine solar saltern in Korea
JH Yoon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Halobacillus dabanensis sp nov and Halobacillus aidingensis sp nov., isolated from salt lakes in Xinjiang, China
WY Liu et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Trends between gene content and genome size in prokaryotic species with larger genomes
KT Konstantinidis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Halobacillus locisalis sp nov., a halophilic bacterium isolated from a marine solar saltern of the Yellow Sea in Korea
JH Yoon et al.
EXTREMOPHILES (2004)
Halobacillus karajensis sp nov., a novel moderate halophile
MA Amoozegar et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Halobacillus salinus sp nov., isolated from a salt lake on the coast of the East Sea in Korea
JH Yoon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)