4.7 Article

Enhancer RNA Profiling in Smoking and HPV Associated HNSCC Reveals Associations to Key Oncogenes

Related references

Note: Only part of the references are listed.
Review Biochemistry & Molecular Biology

Current Advances on the Important Roles of Enhancer RNAs in Molecular Pathways of Cancer

Rui Wang et al.

Summary: Enhancers are critical genomic elements that regulate gene transcription and produce a class of noncoding RNAs called enhancer RNAs (eRNAs). Studies have shown that eRNAs play important roles in enhancer activation and gene regulation in cancer cells, and targeting eRNAs may hold promise for cancer therapy.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)

Article Multidisciplinary Sciences

B cell signatures and tertiary lymphoid structures contribute to outcome in head and neck squamous cell carcinoma

Ayana T. Ruffin et al.

Summary: The study suggests that enhancing TIL-B responses in HNSCC, particularly in HPV+ cases, could complement current T cell immunotherapies. The presence of tumor infiltrating B cells with GCs in TLS is associated with better survival outcomes in head and neck squamous cell carcinoma patients.

NATURE COMMUNICATIONS (2021)

Article Biochemistry & Molecular Biology

The reactome pathway knowledgebase

Bijay Jassal et al.

NUCLEIC ACIDS RESEARCH (2020)

Article Immunology

Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer

Anthony R. Cillo et al.

IMMUNITY (2020)

Review Cell Biology

Diversity and Emerging Roles of Enhancer RNA in Regulation of Gene Expression and Cell Fate

Preston R. Arnold et al.

FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY (2020)

Article Medicine, General & Internal

Head and neck squamous cell carcinoma

Daniel E. Johnson et al.

NATURE REVIEWS DISEASE PRIMERS (2020)

Article Multidisciplinary Sciences

Transcriptional landscape and clinical utility of enhancer RNAs for eRNA-targeted therapy in cancer

Zhao Zhang et al.

NATURE COMMUNICATIONS (2019)

Article Medicine, Research & Experimental

Mutational analysis of head and neck squamous cell carcinoma stratified by smoking status

Farhad Ghasemi et al.

JCI INSIGHT (2019)

Article Environmental Sciences

Differential Effect of Smoking on Gene Expression in Head and Neck Cancer Patients

Alexandra Iulia Irimie et al.

INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH (2018)

Article Oncology

Major Risk Factors in Head and Neck Cancer: A Retrospective Analysis of 12-Year Experiences

Anil Kumar Dhull et al.

WORLD JOURNAL OF ONCOLOGY (2018)

Review Oncology

Tobacco-related carcinogenesis in head and neck cancer

Ashok R. Jethwa et al.

CANCER AND METASTASIS REVIEWS (2017)

Article Biotechnology & Applied Microbiology

Characterizing genomic alterations in cancer by complementary functional associations

Jong Wook Kim et al.

NATURE BIOTECHNOLOGY (2016)

Article Mathematical & Computational Biology

On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase

Hans Ienasescu et al.

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2016)

Review Otorhinolaryngology

A 20-Year Review of 75 Cases of Salivary Duct Carcinoma

Mark R. Gilbert et al.

JAMA OTOLARYNGOLOGY-HEAD & NECK SURGERY (2016)

Article Medicine, General & Internal

Implications of Genetic and Epigenetic Alterations of CDKN2A (p16INK4a) in Cancer

Ran Zhao et al.

EBIOMEDICINE (2016)

Article Multidisciplinary Sciences

Comprehensive genomic characterization of head and neck squamous cell carcinomas

Michael S. Lawrence et al.

NATURE (2015)

Article Biochemical Research Methods

HISAT: a fast spliced aligner with low memory requirements

Daehwan Kim et al.

NATURE METHODS (2015)

Article Oncology

Genetic Susceptibility to Head and Neck Squamous Cell Carcinoma

Martin Lacko et al.

INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS (2014)

Article Multidisciplinary Sciences

An atlas of active enhancers across human cell types and tissues

Robin Andersson et al.

NATURE (2014)

Article Multidisciplinary Sciences

A promoter-level mammalian expression atlas

Alistair R. R. Forrest et al.

NATURE (2014)

Article Dentistry, Oral Surgery & Medicine

Epidemiologic Trends in Head and Neck Cancer and Aids in Diagnosis

Nadarajah Vigneswaran et al.

ORAL AND MAXILLOFACIAL SURGERY CLINICS OF NORTH AMERICA (2014)

Review Biochemistry & Molecular Biology

Unraveling the molecular genetics of head and neck cancer through genome-wide approaches

Nadeem Riaz et al.

GENES & DISEASES (2014)

Article Otorhinolaryngology

High Frequency of Activating PIK3CA Mutations in Human Papillomavirus-Positive Oropharyngeal Cancer

Anthony C. Nichols et al.

JAMA OTOLARYNGOLOGY-HEAD & NECK SURGERY (2013)

Article Biochemical Research Methods

Molecular signatures database (MSigDB) 3.0

Arthur Liberzon et al.

BIOINFORMATICS (2011)

Article Oncology

Human Papillomavirus and Rising Oropharyngeal Cancer Incidence in the United States

Anil K. Chaturvedi et al.

JOURNAL OF CLINICAL ONCOLOGY (2011)

Article Biochemical Research Methods

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan et al.

BIOINFORMATICS (2010)

Article Multidisciplinary Sciences

Widespread transcription at neuronal activity-regulated enhancers

Tae-Kyung Kim et al.

NATURE (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)