Related references
Note: Only part of the references are listed.Active module identification in intracellular networks using a memetic algorithm with a new binary decoding scheme
Dong Li et al.
BMC GENOMICS (2017)
Prior knowledge guided active modules identification: an integrated multi-objective approach
Weiqi Chen et al.
BMC SYSTEMS BIOLOGY (2017)
The role of JAK-STAT signaling pathway and its regulators in the fate of T helper cells
Farhad Seif et al.
CELL COMMUNICATION AND SIGNALING (2017)
Ensembl 2016
Andrew Yates et al.
NUCLEIC ACIDS RESEARCH (2016)
xHeinz: an algorithm for mining cross-species network modules under a flexible conservation model
Mohammed El-Kebir et al.
BIOINFORMATICS (2015)
ModuleBlast: identifying activated sub-networks within and across species
Guy E. Zinman et al.
NUCLEIC ACIDS RESEARCH (2015)
STRING v10: protein-protein interaction networks, integrated over the tree of life
Damian Szklarczyk et al.
NUCLEIC ACIDS RESEARCH (2015)
Prolactin induces the production of Th17 and Th1 cytokines/chemokines in murine Imiquimod-induced psoriasiform skin
C. S. Hau et al.
JOURNAL OF THE EUROPEAN ACADEMY OF DERMATOLOGY AND VENEREOLOGY (2014)
DiME: A Scalable Disease Module Identification Algorithm with Application to Glioma Progression
Yunpeng Liu et al.
PLOS ONE (2014)
Bhlhe40 controls cytokine production by Tcells and is essential for pathogenicity in autoimmune neuroinflammation
Chih-Chung Lin et al.
NATURE COMMUNICATIONS (2014)
Histone Deacetylase Sirtuin 1 Deacetylates IRF1 Protein and Programs Dendritic Cells to Control Th17 Protein Differentiation during Autoimmune Inflammation
Heeyoung Yang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
Dynamic regulatory network controlling TH17 cell differentiation
Nir Yosef et al.
NATURE (2013)
Integrative approaches for finding modular structure in biological networks
Koyel Mitra et al.
NATURE REVIEWS GENETICS (2013)
The vitamin D receptor and T cell function
Martin Kongsbak et al.
FRONTIERS IN IMMUNOLOGY (2013)
Identification of early gene expression changes during human Th17 cell differentiation
Soile Tuomela et al.
BLOOD (2012)
A Validated Regulatory Network for Th17 Cell Specification
Maria Ciofani et al.
CELL (2012)
Evaluation of Gene Association Methods for Coexpression Network Construction and Biological Knowledge Discovery
Sapna Kumari et al.
PLOS ONE (2012)
COSINE: COndition-SpecIfic sub-NEtwork identification using a global optimization method
Haisu Ma et al.
BIOINFORMATICS (2011)
Influenza A Inhibits Th17-Mediated Host Defense against Bacterial Pneumonia in Mice
Anupa Kudva et al.
JOURNAL OF IMMUNOLOGY (2011)
T-bet represses T(H)17 differentiation by preventing Runx1-mediated activation of the gene encoding ROR gamma t
Vanja Lazarevic et al.
NATURE IMMUNOLOGY (2011)
Efficient Euclidean projections via Piecewise Root Finding and its application in gradient projection
Pinghua Gong et al.
NEUROCOMPUTING (2011)
Community extraction for social networks
Yunpeng Zhao et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Whole blood transcriptional profiling in ankylosing spondylitis identifies novel candidate genes that might contribute to the inflammatory and tissue-destructive disease aspects
Fernando M. Pimentel-Santos et al.
ARTHRITIS RESEARCH & THERAPY (2011)
Integrative Analysis of Many Weighted Co-Expression Networks Using Tensor Computation
Wenyuan Li et al.
PLOS COMPUTATIONAL BIOLOGY (2011)
Differentiation of Effector CD4 T Cell Populations
Jinfang Zhu et al.
ANNUAL REVIEW OF IMMUNOLOGY, VOL 28 (2010)
Detecting disease associated modules and prioritizing active genes based on high throughput data
Yu-Qing Qiu et al.
BMC BIOINFORMATICS (2010)
Diverse Targets of the Transcription Factor STAT3 Contribute to T Cell Pathogenicity and Homeostasis
Lydia Durant et al.
IMMUNITY (2010)
Vitamin D Suppresses Th17 Cytokine Production by Inducing C/EBP Homologous Protein (CHOP) Expression
Seon Hee Chang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
STAT1-Activating Cytokines Limit Th17 Responses through Both T-bet-Dependent and -Independent Mechanisms
Alejandro V. Villarino et al.
JOURNAL OF IMMUNOLOGY (2010)
Signal transduction and Th17 cell differentiation
John J. O'Shea et al.
MICROBES AND INFECTION (2009)
ON NONCONVEX QUADRATIC PROGRAMMING WITH BOX CONSTRAINTS
Samuel Burer et al.
SIAM JOURNAL ON OPTIMIZATION (2009)
Identifying functional modules in protein-protein interaction networks:: an integrated exact approach
Marcus T. Dittrich et al.
BIOINFORMATICS (2008)
WGCNA: an R package for weighted correlation network analysis
Peter Langfelder et al.
BMC BIOINFORMATICS (2008)
Hepatitis C virus-specific th17 cells are suppressed by virus-induced TGF-β
Aileen G. Rowan et al.
JOURNAL OF IMMUNOLOGY (2008)
Projected gradient methods for nonnegative matrix factorization
Chih-Jen Lin
NEURAL COMPUTATION (2007)
Network-based classification of breast cancer metastasis
Han-Yu Chuang et al.
MOLECULAR SYSTEMS BIOLOGY (2007)
Systematic construction of gene coexpression networks with applications to human T helper cell differentiation process
Laura L. Elo et al.
BIOINFORMATICS (2007)
Compressed sensing
DL Donoho
IEEE TRANSACTIONS ON INFORMATION THEORY (2006)
Inferring pathways from gene lists using a literature-derived network of biological relationships
D Rajagopalan et al.
BIOINFORMATICS (2005)
A general framework for weighted gene co-expression network analysis
Bin Zhang et al.
STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY (2005)
Regularization and variable selection via the elastic net
H Zou et al.
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY (2005)
Coexpression analysis of human genes across many microarray data sets
HK Lee et al.
GENOME RESEARCH (2004)
Conserved homeodomain proteins interact with MADS box protein Mcm1 to restrict ECB-dependent transcription to the M/G1 phase of the cell cycle
T Pramila et al.
GENES & DEVELOPMENT (2002)
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
R Edgar et al.
NUCLEIC ACIDS RESEARCH (2002)
Missing value estimation methods for DNA microarrays
O Troyanskaya et al.
BIOINFORMATICS (2001)