4.7 Article

A systematic genome-wide account of binding sites for the model transcription factor Gcn4

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Accessibility of promoter DNA is not the primary determinant of chromatin-mediated gene regulation

Razvan V. Chereji et al.

GENOME RESEARCH (2019)

Article Biochemistry & Molecular Biology

Absolute nucleosome occupancy map for the Saccharomyces cerevisiae genome

Elisa Oberbeckmann et al.

GENOME RESEARCH (2019)

Article Biochemistry & Molecular Biology

Gcn4 Binding in Coding Regions Can Activate Internal and Canonical 50 Promoters in Yeast

Yashpal Rawal et al.

MOLECULAR CELL (2018)

Review Biochemistry & Molecular Biology

SELEX methods on the road to protein targeting with nucleic acid aptamers

Payam Bayat et al.

BIOCHIMIE (2018)

Article Biochemistry & Molecular Biology

Structural basis of damage recognition by thymine DNA glycosylase: Key roles for N-terminal residues

Christopher T. Coey et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Chemistry, Multidisciplinary

A designed DNA binding motif that recognizes extended sites and spans two adjacent major grooves

Jessica Rodriguez et al.

CHEMICAL SCIENCE (2016)

Article Biotechnology & Applied Microbiology

Current approaches in SELEX: An update to aptamer selection technology

Mariia Darmostuk et al.

BIOTECHNOLOGY ADVANCES (2015)

Article Biochemical Research Methods

Fast gapped-read alignment with Bowtie 2

Ben Langmead et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan et al.

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

High-resolution DNA-binding specificity analysis of yeast transcription factors

Cong Zhu et al.

GENOME RESEARCH (2009)

Article Biochemistry & Molecular Biology

MEME SUITE: tools for motif discovery and searching

Timothy L. Bailey et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Biotechnology & Applied Microbiology

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang et al.

GENOME BIOLOGY (2008)

Article Biochemical Research Methods

An improved map of conserved regulatory sites for Saccharomyces cerevisiae

KD MacIsaac et al.

BMC BIOINFORMATICS (2006)

Article Biochemistry & Molecular Biology

DIP-chip: Rapid and accurate determination of DNA-binding specificity

X Liu et al.

GENOME RESEARCH (2005)

Review Microbiology

Translational regulation of GCN4 and the general amino acid control of yeast

AG Hinnebusch

ANNUAL REVIEW OF MICROBIOLOGY (2005)

Article Multidisciplinary Sciences

Transcriptional regulatory code of a eukaryotic genome

CT Harbison et al.

NATURE (2004)

Article Biochemistry & Molecular Biology

Structure of a designed dimeric zinc finger protein bound to DNA

SA Wolfe et al.

BIOCHEMISTRY (2003)

Review Biochemistry & Molecular Biology

Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast

K Natarajan et al.

MOLECULAR AND CELLULAR BIOLOGY (2001)