4.5 Article

Whole-Genome Sequences of Two Kazachstania barnettii Strains Isolated from Anthropic Environments

Related references

Note: Only part of the references are listed.
Article Mycology

Kazachstania slooffiae: An unexpected journey to a human pleural sample

Victor Mercier et al.

Summary: A 50-year-old shepherd was hospitalized in the intensive care unit for hiatal hernia complicated by an occlusive syndrome. Post-surgery, acute respiratory distress occurred due to mediastinitis with large pleural effusion. Laboratory examination revealed the presence of pseudohyphae in the pleural sample, with Kazachstania slooffiae identified by Mass Spectrometry and confirmed by DNA sequencing. This uncommon yeast has never been described in human infections and should be considered in critically ill patients.

JOURNAL DE MYCOLOGIE MEDICALE (2021)

Article Biochemistry & Molecular Biology

The InterPro protein families and domains database: 20 years on

Matthias Blum et al.

Summary: InterPro database offers a comprehensive classification of protein sequences and is a widely used resource for protein family annotation. Its software InterProScan allows users to search protein and nucleic acid sequences against InterPro's signatures.

NUCLEIC ACIDS RESEARCH (2021)

Article Microbiology

Fungal Species Diversity in French Bread Sourdoughs Made of Organic Wheat Flour

Charlotte Urien et al.

FRONTIERS IN MICROBIOLOGY (2019)

Article Microbiology

Draft Genome Sequences of Two Isolates of the Yeast Kazachstania servazzii Recovered from Soil in Ireland

Lynne Faherty et al.

MICROBIOLOGY RESOURCE ANNOUNCEMENTS (2019)

Article Agriculture, Dairy & Animal Science

Porcine intestinal yeast species, Kazachstania slooffiae, a new potential protein source with favourable amino acid composition for animals

V. Urubschurov et al.

JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION (2018)

Article Biochemical Research Methods

MUMmer4: A fast and versatile genome alignment system

Guillaume Marcais et al.

PLOS COMPUTATIONAL BIOLOGY (2018)

Article Biochemistry & Molecular Biology

Bakery yeasts, a new model for studies in ecology and evolution

Belen Carbonetto et al.

YEAST (2018)

Article Biochemistry & Molecular Biology

Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum

Xing-Xing Shen et al.

Article Biotechnology & Applied Microbiology

Spoilage of vacuum-packed beef by the yeast Kazachstania psychrophila

Jan Kabisch et al.

FOOD MICROBIOLOGY (2016)

Article Biochemical Research Methods

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

Felipe A. Simao et al.

BIOINFORMATICS (2015)

Article Multidisciplinary Sciences

Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts

Guillaume Morel et al.

SCIENTIFIC REPORTS (2015)

Review Biotechnology & Applied Microbiology

Clade- and species-specific features of genome evolution in the Saccharomycetaceae

Kenneth H. Wolfe et al.

FEMS YEAST RESEARCH (2015)

Article Biochemical Research Methods

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony M. Bolger et al.

BIOINFORMATICS (2014)

Article Biochemistry & Molecular Biology

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads

Rei Kajitani et al.

GENOME RESEARCH (2014)

Letter Biochemical Research Methods

ORCAE: online resource for community annotation of eukaryotes

Lieven Sterck et al.

NATURE METHODS (2012)

Article Biochemistry & Molecular Biology

Database resources of the National Center for Biotechnology Information

Eric W. Sayers et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Multidisciplinary Sciences

Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents

Jonathan L. Gordon et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

BLAST plus : architecture and applications

Christiam Camacho et al.

BMC BIOINFORMATICS (2009)

Article Food Science & Technology

Evaluation of ribosomal RNA and actin gene sequences for the identification of ascomycetous yeasts

HM Daniel et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2003)

Article Microbiology

Partial sequence analysis of the actin gene and its potential for studying the phylogeny of Candida species and their teleomorphs

HM Daniel et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2001)