Related references
Note: Only part of the references are listed.Color-tuning of natural variants of heliorhodopsin
Se-Hwan Kim et al.
SCIENTIFIC REPORTS (2021)
Microbial Rhodopsins: The Last Two Decades
Andrey Rozenberg et al.
ANNUAL REVIEW OF MICROBIOLOGY, VOL 75, 2021 (2021)
Vibrational modes of water predict spectral niches for photosynthesis in lakes and oceans
Tadzio Holtrop et al.
NATURE ECOLOGY & EVOLUTION (2021)
Conserved genomic neighborhood is a strong but no perfect indicator for a direct interaction of microbial gene products
Robert Esch et al.
BMC BIOINFORMATICS (2020)
Retinal Proteins: Photochemistry and Optogenetics
Hideki Kandori
BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN (2020)
High-resolution structural insights into the heliorhodopsin family
K. Kovalev et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria)
Thomas Cavalier-Smith et al.
PROTOPLASMA (2020)
Bacterium Lacking a Known Gene for Retinal Biosynthesis Constructs Functional Rhodopsins
Yu Nakajima et al.
MICROBES AND ENVIRONMENTS (2020)
Photochemical Characterization of a New Heliorhodopsin from the Gram-Negative Eubacterium Bellilinea caldifistulae (BcHeR) and Comparison with Heliorhodopsin-48C12
Atsushi Shibukawa et al.
BIOCHEMISTRY (2019)
Crystal structure of heliorhodopsin
Wataru Shihoya et al.
NATURE (2019)
Heliorhodopsins are absent in diderm (Gram-negative) bacteria: Some thoughts and possible implications for activity
Jose Flores-Uribe et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2019)
ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
Chao Zhang et al.
BMC BIOINFORMATICS (2018)
Arachidonic Acid Stress Impacts Pneumococcal Fatty Acid Homeostasis
Bart A. Eijkelkamp et al.
FRONTIERS IN MICROBIOLOGY (2018)
A distinct abundant group of microbial rhodopsins discovered using functional metagenomics
Alina Pushkarev et al.
NATURE (2018)
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
Donovan H. Parks et al.
NATURE BIOTECHNOLOGY (2018)
Strand specific RNA-sequencing and membrane lipid profiling reveals growth phase-dependent cold stress response mechanisms in Listeria monocytogenes
Patricia Hingston et al.
PLOS ONE (2017)
Light-independent phospholipid scramblase activity of bacteriorhodopsin from Halobacterium salinarum
Alice Verchere et al.
SCIENTIFIC REPORTS (2017)
Functional metagenomic screen reveals new and diverse microbial rhodopsins
Alina Pushkarev et al.
ISME JOURNAL (2016)
Transcription Regulation in Archaea
Alexandra M. Gehring et al.
JOURNAL OF BACTERIOLOGY (2016)
Biochemical Roles for Conserved Residues in the Bacterial Fatty Acid-binding Protein Family
Tyler C. Broussard et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2016)
Characterization of an Unconventional Rhodopsin from the Freshwater Actinobacterium Rhodoluna lacicola
J. L. Keffer et al.
JOURNAL OF BACTERIOLOGY (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
An Approach to Heterologous Expression of Membrane Proteins. The Case of Bacteriorhodopsin
Dmitry Bratanov et al.
PLOS ONE (2015)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
Microbial and Animal Rhodopsins: Structures, Functions, and Molecular Mechanisms
Oliver P. Ernst et al.
CHEMICAL REVIEWS (2014)
Pfam: the protein families database
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2014)
Nature's toolkit for microbial rhodopsin ion pumps
Oded Beja et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Identification of a two-component fatty acid kinase responsible for host fatty acid incorporation by Staphylococcus aureus
Joshua B. Parsons et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Constitutive phospholipid scramblase activity of a G protein-coupled receptor
Michael A. Goren et al.
NATURE COMMUNICATIONS (2014)
Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria
Rohit Ghai et al.
SCIENTIFIC REPORTS (2013)
Proteinortho: Detection of (Co-)orthologs in large-scale analysis
Marcus Lechner et al.
BMC BIOINFORMATICS (2011)
Ab initio gene identification in metagenomic sequences
Wenhan Zhu et al.
NUCLEIC ACIDS RESEARCH (2010)
Colorful niches of phototrophic microorganisms shaped by vibrations of the water molecule
Maayke Stomp et al.
ISME JOURNAL (2007)
Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host
A. Martinez et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Small substrate, big surprise: fold, function and phylogeny of dihydroxyacetone kinases
B Erni et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2006)
New insights into metabolic properties of marine bacteria encoding proteorhodopsins
G Sabehi et al.
PLOS BIOLOGY (2005)
Molecular basis of bacterial outer membrane permeability revisited
H Nikaido
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2003)
Connected gene neighborhoods in prokaryotic genomes
IB Rogozin et al.
NUCLEIC ACIDS RESEARCH (2002)