Related references
Note: Only part of the references are listed.Transforming growth factor beta signaling: The master sculptor of fingers
Carlos I. Lorda-Diez et al.
DEVELOPMENTAL DYNAMICS (2022)
The Gene Ontology resource: enriching a GOld mine
Seth Carbon et al.
NUCLEIC ACIDS RESEARCH (2021)
Spatial regulation by multiple Gremlin1 enhancers provides digit development with cis-regulatory robustness and evolutionary plasticity
Jonas Malkmus et al.
NATURE COMMUNICATIONS (2021)
Mechanisms and regulation of cholesterol homeostasis
Jie Luo et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2020)
BMP Signaling Gradient Scaling in the Zebrafish Pectoral Fin
Rita Mateus et al.
CELL REPORTS (2020)
Gene Regulatory and Expression Differences between Mouse and Pig Limb Buds Provide Insights into the Evolutionary Emergence of Artiodactyl Traits
Virginie Tissieres et al.
CELL REPORTS (2020)
Cholesterol access in cellular membranes controls Hedgehog signaling
Arun Radhakrishnan et al.
NATURE CHEMICAL BIOLOGY (2020)
Molecular signatures identify immature mesenchymal progenitors in early mouse limb buds that respond differentially to morphogen signaling
Robert Reinhardt et al.
DEVELOPMENT (2019)
PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools
Huaiyu Mi et al.
NUCLEIC ACIDS RESEARCH (2019)
Hedgehog signaling patterns the oral-aboral axis of the mandibular arch
Jingyue Xu et al.
ELIFE (2019)
SMOC can act as both an antagonist and an expander of BMP signaling
J. Terrig Thomas et al.
ELIFE (2017)
Characterization of cholesterol homeostasis in sphingosine-1-phosphate lyase-deficient fibroblasts reveals a Niemann-Pick disease type C-like phenotype with enhanced lysosomal Ca2+ storage
Hans Vienken et al.
SCIENTIFIC REPORTS (2017)
STARD3 mediates endoplasmic reticulum-to-endosome cholesterol transport at membrane contact sites
Lea P. Wilhelm et al.
EMBO JOURNAL (2017)
Chromatin Domains: The Unit of Chromosome Organization
Jesse R. Dixon et al.
MOLECULAR CELL (2016)
Using combined evidence from replicates to evaluate ChIP-seq peaks
Vahid Jalili et al.
BIOINFORMATICS (2015)
Next generation limb development and evolution: old questions, new perspectives
Aimee Zuniga
DEVELOPMENT (2015)
BMP-Smad4 signaling is required for precartilaginous mesenchymal condensation independent of Sox9 in the mouse
Joohyun Lim et al.
DEVELOPMENTAL BIOLOGY (2015)
BMP-SHH Signaling Network Controls Epithelial Stem Cell Fate via Regulation of Its Niche in the Developing Tooth
Jingyuan Li et al.
DEVELOPMENTAL CELL (2015)
HTSeq-a Python framework to work with high-throughput sequencing data
Simon Anders et al.
BIOINFORMATICS (2015)
bwtool: a tool for bigWig files
Andy Pohl et al.
BIOINFORMATICS (2014)
Dynamics of BMP signaling in limb bud mesenchyme and polydactyly
Jacqueline L. Norrie et al.
DEVELOPMENTAL BIOLOGY (2014)
HAND2 Targets Define a Network of Transcriptional Regulators that Compartmentalize the Early Limb Bud Mesenchyme
Marco Osterwalder et al.
DEVELOPMENTAL CELL (2014)
To BMP or not to BMP during vertebrate limb bud development
Emanuele Pignatti et al.
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2014)
The hedgehog target Vlk genetically interacts with Gli3 to regulate chondrocyte differentiation during mouse long bone development
Simone Probst et al.
DIFFERENTIATION (2013)
Dual Requirement of Ectodermal Smad4 During AER Formation and Termination of Feedback Signaling in Mouse Limb Buds
Jean-Denis Benazet et al.
GENESIS (2013)
Compensatory regulation of the Snai1 and Snai2 genes during chondrogenesis
Ying Chen et al.
JOURNAL OF BONE AND MINERAL RESEARCH (2013)
Identification of candidate downstream targets of TGFβ signaling during palate development by genome-wide transcript profiling
Richard C. Pelikan et al.
JOURNAL OF CELLULAR BIOCHEMISTRY (2013)
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
Jason D. Buenrostro et al.
NATURE METHODS (2013)
The mechanisms of Hedgehog signalling and its roles in development and disease
James Briscoe et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2013)
Tbx2 Terminates Shh/Fgf Signaling in the Developing Mouse Limb Bud by Direct Repression of Gremlin1
Henner F. Farin et al.
PLOS GENETICS (2013)
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim et al.
GENOME BIOLOGY (2013)
The TGFbeta Superfamily Signaling Pathway
Alexander Weiss et al.
WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2013)
Smad4 is required to induce digit ray primordia and to initiate the aggregation and differentiation of chondrogenic progenitors in mouse limb buds
Jean-Denis Benazet et al.
DEVELOPMENT (2012)
GLI3 Constrains Digit Number by Controlling Both Progenitor Proliferation and BMP-Dependent Exit to Chondrogenesis
Javier Lopez-Rios et al.
DEVELOPMENTAL CELL (2012)
Topological domains in mammalian genomes identified by analysis of chromatin interactions
Jesse R. Dixon et al.
NATURE (2012)
SMOC1 Is Essential for Ocular and Limb Development in Humans and Mice
Ippei Okada et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2011)
FIMO: scanning for occurrences of a given motif
Charles E. Grant et al.
BIOINFORMATICS (2011)
SHH propagates distal limb bud development by enhancing CYP26B1-mediated retinoic acid clearance via AER-FGF signalling
Simone Probst et al.
DEVELOPMENT (2011)
Analysis of Mutants With Altered Shh Activity and Posterior Digit Loss Supports a Biphasic Model for Shh Function as a Morphogen and Mitogen
Jianjian Zhu et al.
DEVELOPMENTAL DYNAMICS (2011)
Defects in cholesterol synthesis genes in mouse and in humans: lessons for drug development and safer treatments
Simon Horvat et al.
DRUG METABOLISM REVIEWS (2011)
Malformation syndromes caused by disorders of cholesterol synthesis
Forbes D. Porter et al.
JOURNAL OF LIPID RESEARCH (2011)
Global Gene Expression Analysis of Murine Limb Development
Leila Taher et al.
PLOS ONE (2011)
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
Mark D. Robinson et al.
BIOINFORMATICS (2010)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Regulation of BMP-dependent chondrogenesis in early limb mesenchyme by TGFβ signals
Konstantina Karamboulas et al.
JOURNAL OF CELL SCIENCE (2010)
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
Sven Heinz et al.
MOLECULAR CELL (2010)
Wnt signaling in limb organogenesis
Poongodi Geetha-Loganathan et al.
Organogenesis (2010)
A BMP-Shh negative-feedback loop restricts Shh expression during limb development
Ma Felix Bastida et al.
DEVELOPMENT (2009)
LIM homeobox transcription factors integrate signaling events that control three-dimensional limb patterning and growth
Itai Tzchori et al.
DEVELOPMENT (2009)
Short Limbs, Cleft Palate, and Delayed Formation of Flat Proliferative Chondrocytes in Mice With Targeted Disruption of a Putative Protein Kinase Gene, Pkdcc (AW548124)
Yu Imuta et al.
DEVELOPMENTAL DYNAMICS (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
A Self-Regulatory System of Interlinked Signaling Feedback Loops Controls Mouse Limb Patterning
Jean-Denis Benazet et al.
SCIENCE (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
Uncoupling sonic hedgehog control of pattern and expansion of the developing limb bud
Jianjian Zhu et al.
DEVELOPMENTAL CELL (2008)
An Fgf/Gremlin inhibitory feedback loop triggers termination of limb bud outgrowth
Jamie M. Verheyden et al.
NATURE (2008)
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang et al.
GENOME BIOLOGY (2008)
BMP signals control limb bud interdigital programmed cell death by regulating FGF signaling
Sangeeta Pajni-Underwood et al.
DEVELOPMENT (2007)
VISTA Enhancer Browser - a database of tissue-specific human enhancers
Axel Visel et al.
NUCLEIC ACIDS RESEARCH (2007)
Genetic analysis of the roles of BMP2, BMP4, and BMP7 in limb patterning and skeletogenesis
Amitabha Bandyopadhyay et al.
PLOS GENETICS (2006)
Differential regulation of gene expression in the digit forming area of the mouse limb bud by SHH and gremlin 1/FGF-mediated epithelial-mesenchymal signalling
Lia Panman et al.
DEVELOPMENT (2006)
The use of the Dhcr7 knockout mouse to accurately determine the origin of fetal sterols
G. S. Tint et al.
JOURNAL OF LIPID RESEARCH (2006)
BMP receptor type IA in limb bud mesenchyrne regulates distal outgrowth and patterning
Dmitry A. Ovchinnikov et al.
DEVELOPMENTAL BIOLOGY (2006)
Cholesterol modification restricts the spread of Shh gradient in the limb bud
YN Li et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Function and regulation of Alx4 in limb development:: Complex genetic interactions with Gli3 and Shh
S Kuijper et al.
DEVELOPMENTAL BIOLOGY (2005)
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
A Siepel et al.
GENOME RESEARCH (2005)
Analysis of Msx1;: Msx2 double mutants reveals multiple roles for Msx genes in limb development
Y Lallemand et al.
DEVELOPMENT (2005)
Epithelial hedgehog signals pattern the intestinal crypt-villus axis
BB Madison et al.
DEVELOPMENT (2005)
Evidence for an expansion-based temporal Shh gradient in specifying vertebrate digit identities
BD Harfe et al.
CELL (2004)
Bmp4 in limb bud mesoderm regulates digit pattern by controlling AER development
J Selever et al.
DEVELOPMENTAL BIOLOGY (2004)
Differential requirements for Smad4 in TGFβ-dependent patterning of the early mouse embryo
GC Chu et al.
DEVELOPMENT (2004)
The limb bud Shh-Fgf feedback loop is terminated by expansion of former ZPA cells
PJ Scherz et al.
SCIENCE (2004)
A phylogenetically conserved cis-regulatory module in the Msx2 promoter is sufficient for BMP-dependent transcription in murine and Drosophila embryos
SM Brugger et al.
DEVELOPMENT (2004)
Activin regulation of the follicle-stimulating hormone β-subunit gene involves Smads and the TALE homeodomain proteins Pbx1 and Prep1
JS Bailey et al.
MOLECULAR ENDOCRINOLOGY (2004)
Lathosterolosis:: an inborn error of human and murine cholesterol synthesis due to lathosterol 5-desaturase deficiency
PA Krakowiak et al.
HUMAN MOLECULAR GENETICS (2003)
A defective response to Hedgehog signaling in disorders of cholesterol biosynthesis
MK Cooper et al.
NATURE GENETICS (2003)
Feedback control of mammalian hedgehog signaling by the hedgehog-binding protein, Hip1, modulates Fgf signaling during branching morphogenesis of the lung
PT Chuang et al.
GENES & DEVELOPMENT (2003)
Shh-Bmp2 signaling module and the evolutionary origin and diversification of feathers
MP Harris et al.
JOURNAL OF EXPERIMENTAL ZOOLOGY (2002)
Expression of Cre recombinase in the developing mouse limb bud driven by a Prxl enhancer
M Logan et al.
GENESIS (2002)
TGF-β is required for programmed cell death in interdigital webs of the developing mouse limb
N Dünker et al.
MECHANISMS OF DEVELOPMENT (2002)
Identification and functional characterization of distinct critically important bone morphogenetic protein-specific response elements in the Id1 promoter
O Korchynskyi et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Generation of Smad4/Dpc4 conditional knockout mice
X Yang et al.
GENESIS (2002)
Direct binding of Smad1 and Smad4 to two distinct motifs mediates bone morphogenetic protein-specific transcriptional activation of Id1 gene
T López-Rovira et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Opponent activities of Shh and BMP signaling during floor plate induction in vivo
I Patten et al.
CURRENT BIOLOGY (2002)
Dickkopf1 is required for embryonic head induction and limb morphogenesis in the mouse
M Mukhopadhyay et al.
DEVELOPMENTAL CELL (2001)
Smad7 and Smad6 differentially modulate transforming growth factor β-induced inhibition of embryonic lung morphogenesis
JS Zhao et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
BMPs are required at two steps of limb chondrogenesis: Formation of prechondrogenic condensations and their differentiation into chondrocytes
S Pizette et al.
DEVELOPMENTAL BIOLOGY (2000)
Share Paper
