Journal
BMC MEDICINE
Volume 19, Issue 1, Pages -Publisher
BMC
DOI: 10.1186/s12916-021-02178-z
Keywords
COVID-19; Epidemiology; Incubation period; Non-pharmaceutical intervention; SEIR model
Categories
Funding
- Bill AMP
- Melinda Gates Foundation, Seattle, WA [INV-006277]
- National Natural Science Foundation of China [82073612]
- Shanghai Municipal Health Commission [GWV-10.1-XK16]
- Science and Technology Commission of Shanghai Municipality [20dz1200600]
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From January 2 to February 14, 2021, a local outbreak of COVID-19 occurred in the city of Shijiazhuang, with 869 symptomatic cases reported. Most cases were confirmed before January 20. The estimated incubation period was 11.6 days, and the estimated serial interval was 6.6 days. Simulation results suggested that a longer incubation period would lead to a longer epidemic period, and reducing quarantine measures would require increased nucleic acid testing to minimize cases.
Background From 2 January to 14 February 2021, a local outbreak of COVID-19 occurred in Shijiazhuang, the capital city of Hebei Province, with a population of 10 million. We analyzed the characteristics of the local outbreak of COVID-19 in Shijiazhuang and evaluated the effects of serial interventions. Methods Publicly available data, which included age, sex, date of diagnosis, and other patient information, were used to analyze the epidemiological characteristics of the COVID-19 outbreak in Shijiazhuang. The maximum likelihood method and Hamiltonian Monte Carlo method were used to estimate the serial interval and incubation period, respectively. The impact of incubation period and different interventions were simulated using a well-fitted SEIR+q model. Results From 2 January to 14 February 2021, there were 869 patients with symptomatic COVID-19 in Shijiazhuang, and most cases (89.6%) were confirmed before 20 January. Overall, 40.2% of the cases were male, 16.3% were aged 0 to 19 years, and 21.9% were initially diagnosed as asymptomatic but then became symptomatic. The estimated incubation period was 11.6 days (95% CI 10.6, 12.7 days) and the estimated serial interval was 6.6 days (0.025(th), 0.975(th): 0.6, 20.0 days). The results of the SEIR+q model indicated that a longer incubation period led to a longer epidemic period. If the comprehensive quarantine measures were reduced by 10%, then the nucleic acid testing would need to increase by 20% or more to minimize the cumulative number of cases. Conclusions Incubation period was longer than serial interval suggested that more secondary transmission may occur before symptoms onset. The long incubation period made it necessary to extend the isolation period to control the outbreak. Timely contact tracing and implementation of a centralized quarantine quickly contained this epidemic in Shijiazhuang. Large-scale nucleic acid testing also helped to identify cases and reduce virus transmission.
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