Related references
Note: Only part of the references are listed.The genomics of rapid climatic adaptation and parallel evolution in North American house mice
Kathleen G. Ferris et al.
PLOS GENETICS (2021)
Mouse Phenome Database: a data repository and analysis suite for curated primary mouse phenotype data
Molly A. Bogue et al.
NUCLEIC ACIDS RESEARCH (2020)
Tracking the Near Eastern origins and European dispersal of the western house mouse
Thomas Cucchi et al.
SCIENTIFIC REPORTS (2020)
Polygenic adaptation: a unifying framework to understand positive selection
Neda Barghi et al.
NATURE REVIEWS GENETICS (2020)
The Genomics of Human Local Adaptation
Jasmin S. Rees et al.
TRENDS IN GENETICS (2020)
High-Diversity Mouse Populations for Complex Traits
Michael C. Saul et al.
TRENDS IN GENETICS (2019)
Physiological and genomic evidence that selection on the transcription factor Epas1 has altered cardiovascular function in high-altitude deer mice
Rena M. Schweizer et al.
PLOS GENETICS (2019)
Convergent evolution on the hypoxia-inducible factor (HIF) pathway genes EGLN1 and EPAS1 in high-altitude ducks
Allie M. Graham et al.
HEREDITY (2019)
Immune genes are hotspots of shared positive selection across birds and mammals
Allison J. Shultz et al.
ELIFE (2019)
Genomic trade-offs: are autism and schizophrenia the steep price of the human brain?
J. M. Sikela et al.
HUMAN GENETICS (2018)
A Novel Loss-of-Function Variant in Transmembrane Protein 263 (TMEM263) of Autosomal Dwarfism in Chicken
Zhou Wu et al.
FRONTIERS IN GENETICS (2018)
Whole-Genome Resequencing of Red Junglefowl and Indigenous Village Chicken Reveal New Insights on the Genome Dynamics of the Species
Raman A. Lawal et al.
FRONTIERS IN GENETICS (2018)
Gene regulation underlies environmental adaptation in house mice
Katya L. Mack et al.
GENOME RESEARCH (2018)
The genomic basis of environmental adaptation in house mice
Megan Phifer-Rixey et al.
PLOS GENETICS (2018)
Spinocerebellar ataxia type 11-associated alleles of Ttbk2 dominantly interfere with ciliogenesis and cilium stability
Emily Bowie et al.
PLOS GENETICS (2018)
The genetic prehistory of the Andean highlands 7000 years BP though European contact
John Lindo et al.
SCIENCE ADVANCES (2018)
Mosdepth: quick coverage calculation for genomes and exomes
Brent S. Pedersen et al.
BIOINFORMATICS (2018)
Subspecies differentiation of the house mouse Mus musculus Linnaeus, 1758 in the center and east of the Iranian plateau and Afghanistan
Haddadian Shad Hamid et al.
MAMMALIA (2017)
Whole exome sequencing of wild-derived inbred strains of mice improves power to link phenotype and genotype
Peter L. Chang et al.
MAMMALIAN GENOME (2017)
Differences between germline and somatic mutation rates in humans and mice
Brandon Milholland et al.
NATURE COMMUNICATIONS (2017)
Widespread signatures of positive selection in common risk alleles associated to autism spectrum disorder
Renato Polimanti et al.
PLOS GENETICS (2017)
Mutation of the Human Circadian Clock Gene CRY1 in Familial Delayed Sleep Phase Disorder
Alina Patke et al.
CELL (2017)
Genetic Markers of Human Evolution Are Enriched in Schizophrenia
Saurabh Srinivasan et al.
BIOLOGICAL PSYCHIATRY (2016)
Human adaptation and evolution by segmental duplication
Megan Y. Dennis et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2016)
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
A thrifty variant in CREBRF strongly influences body mass index in Samoans
Ryan L. Minster et al.
NATURE GENETICS (2016)
Early Neolithic genomes from the eastern Fertile Crescent
Farnaz Broushaki et al.
SCIENCE (2016)
Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs
Adam H. Freedman et al.
PLOS GENETICS (2016)
Genomic resources for wild populations of the house mouse, Mus musculus and its close relative Mus spretus
Bettina Harr et al.
SCIENTIFIC DATA (2016)
Eurasian house mouse (Mus musculus L.) differentiation at microsatellite loci identifies the Iranian plateau as a phylogeographic hotspot
Emilie A. Hardouin et al.
BMC EVOLUTIONARY BIOLOGY (2015)
Divergence patterns of genic copy number variation in natural populations of the house mouse (Mus musculus domesticus) reveal three conserved genes with major population-specific expansions
Zeljka Pezer et al.
GENOME RESEARCH (2015)
The International Mouse Strain Resource (IMSR): cataloging worldwide mouse and ES cell line resources
Janan T. Eppig et al.
MAMMALIAN GENOME (2015)
SERINC3 and SERINC5 restrict HIV-1 infectivity and are counteracted by Nef
Yoshiko Usami et al.
NATURE (2015)
Recent Selective Sweeps in North American Drosophila melanogaster Show Signatures of Soft Sweeps
Nandita R. Garud et al.
PLOS GENETICS (2015)
GROM-RD: resolving genomic biases to improve read depth detection of copy number variants
Sean D. Smith et al.
PEERJ (2015)
Second-generation PLINK: rising to the challenge of larger and richer datasets
Christopher C. Chang et al.
GIGASCIENCE (2015)
ANGSD: Analysis of Next Generation Sequencing Data
Thorfinn Sand Korneliussen et al.
BMC BIOINFORMATICS (2014)
Palindromic GOLGA8 core duplicons promote chromosome 15q13.3 microdeletion and evolutionary instability
Francesca Antonacci et al.
NATURE GENETICS (2014)
8-oxoguanine causes spontaneous de novo germline mutations in mice
Mizuki Ohno et al.
SCIENTIFIC REPORTS (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
Characterization of CCDC28B reveals its role in ciliogenesis and provides insight to understand its modifier effect on Bardet-Biedl syndrome
Magdalena Cardenas-Rodriguez et al.
HUMAN GENETICS (2013)
The genomic signature of dog domestication reveals adaptation to a starch-rich diet
Erik Axelsson et al.
NATURE (2013)
Population genomics of rapid adaptation by soft selective sweeps
Philipp W. Messer et al.
TRENDS IN ECOLOGY & EVOLUTION (2013)
Contributions of Protein-Coding and Regulatory Change to Adaptive Molecular Evolution in Murid Rodents
Daniel L. Halligan et al.
PLOS GENETICS (2013)
BEDOPS: high-performance genomic feature operations
Shane Neph et al.
BIOINFORMATICS (2012)
Mutations in LRP5 cause primary osteoporosis without features of OI by reducing Wnt signaling activity
Johanna Korvala et al.
BMC MEDICAL GENETICS (2012)
Codanin-1, mutated in the anaemic disease CDAI, regulates Asf1 function in S-phase histone supply
Katrine Ask et al.
EMBO JOURNAL (2012)
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3
Pablo Cingolani et al.
FLY (2012)
A global view of the OCA2-HERC2 region and pigmentation
Michael P. Donnelly et al.
HUMAN GENETICS (2012)
Adaptive Evolution and Effective Population Size in Wild House Mice
Megan Phifer-Rixey et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
jModelTest 2: more models, new heuristics and parallel computing
Diego Darriba et al.
NATURE METHODS (2012)
Mitochondrial transcription termination factor 2 binds to entire mitochondrial DNA and negatively regulates mitochondrial gene expression
Weiwei Huang et al.
ACTA BIOCHIMICA ET BIOPHYSICA SINICA (2011)
The variant call format and VCFtools
Petr Danecek et al.
BIOINFORMATICS (2011)
VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R
Hanbo Chen et al.
BMC BIOINFORMATICS (2011)
The STARD9/Kif16a Kinesin Associates with Mitotic Microtubules and Regulates Spindle Pole Assembly
Jorge Z. Torres et al.
CELL (2011)
Ccdc66 null mutation causes retinal degeneration and dysfunction
Wanda M. Gerding et al.
HUMAN MOLECULAR GENETICS (2011)
Sequence-based characterization of structural variation in the mouse genome
Binnaz Yalcin et al.
NATURE (2011)
Mouse genomic variation and its effect on phenotypes and gene regulation
Thomas M. Keane et al.
NATURE (2011)
Subspecific origin and haplotype diversity in the laboratory mouse
Hyuna Yang et al.
NATURE GENETICS (2011)
Ensembl BioMarts: a hub for data retrieval across taxonomic space
Rhoda J. Kinsella et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2011)
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
Mark D. Robinson et al.
BIOINFORMATICS (2010)
Robust relationship inference in genome-wide association studies
Ani Manichaikul et al.
BIOINFORMATICS (2010)
Fast and accurate long-read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2010)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Expression of α-taxilin in hepatocellular carcinoma correlates with growth activity and malignant potential of the tumor
Natsuko Ohtomo et al.
INTERNATIONAL JOURNAL OF ONCOLOGY (2010)
Whole-genome resequencing reveals loci under selection during chicken domestication
Carl-Johan Rubin et al.
NATURE (2010)
Natural selection on EPAS1 (HIF2α) associated with low hemoglobin concentration in Tibetan highlanders
Cynthia M. Beall et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Gene expression meta-analysis identifies chromosomal regions and candidate genes involved in breast cancer metastasis
Mads Thomassen et al.
BREAST CANCER RESEARCH AND TREATMENT (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data
Ryan N. Gutenkunst et al.
PLOS GENETICS (2009)
The Role of Geography in Human Adaptation
Graham Coop et al.
PLOS GENETICS (2009)
Inferring the history of speciation in house mice from autosomal, X-linked, Y-linked and mitochondrial genes
Armando Geraldes et al.
MOLECULAR ECOLOGY (2008)
Skint1, the prototype of a newly identified immunoglobulin superfamily gene cluster, positively selects epidermal γδ T cells
Lynn M. Boyden et al.
NATURE GENETICS (2008)
Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact
Melinda A. Zeder
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Diet and the evolution of human amylase gene copy number variation
George H. Perry et al.
NATURE GENETICS (2007)
Linkage disequilibrium in wild mice
Cathy C. Laurie et al.
PLOS GENETICS (2007)
MEX is a testis-specific E3 ubiquitin ligase that promotes death receptor-induced apoptosis
Yasumasa Nishito et al.
BIOCHEMICAL JOURNAL (2006)
How malaria has affected the human genome and what human genetics can teach us about malaria
DP Kwiatkowski
AMERICAN JOURNAL OF HUMAN GENETICS (2005)
Distinguishing between selective sweeps and demography using DNA polymorphism data
JD Jensen et al.
GENETICS (2005)
Linkage of familial hemophagocytic lymphohistiocytosis (FHL) type-4 to chromosome 6q24 and identification of mutations in syntaxin 11
U zur Stadt et al.
HUMAN MOLECULAR GENETICS (2005)
Eye colour: portals into pigmentation genes and ancestry
RA Sturm et al.
TRENDS IN GENETICS (2004)
Amplification of Mdmx (or Mdm4) directly contributes to tumor formation by inhibiting p53 tumor suppressor activity
D Danovi et al.
MOLECULAR AND CELLULAR BIOLOGY (2004)
Deficiencies in mouse Myh and Ogg1 result in tumor predisposition and G to T mutations in codon 12 of the K-Ras oncogene in lung tumors
YL Xie et al.
CANCER RESEARCH (2004)
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
S Guindon et al.
SYSTEMATIC BIOLOGY (2003)
Low-density lipoprotein receptor-related protein 5 (LRP5) is essential for normal cholesterol metabolism and glucose-induced insulin secretion
T Fujino et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Mdm4 (Mdmx) regulates p53-induced growth arrest and neuronal cell death during early embryonic mouse development
D Migliorini et al.
MOLECULAR AND CELLULAR BIOLOGY (2002)
Generating samples under a Wright-Fisher neutral model of genetic variation
RR Hudson
BIOINFORMATICS (2002)
Inherited variants of MYH associated with somatic G:C→T:A mutations in colorectal tumors
N Al-Tassan et al.
NATURE GENETICS (2002)
Different evolutionary processes shaped the mouse and human olfactory receptor gene families
JM Young et al.
HUMAN MOLECULAR GENETICS (2002)
Nuclear gene OPA1, encoding a mitochondrial dynamin-related protein, is mutated in dominant optic atrophy
C Delettre et al.
NATURE GENETICS (2000)
Share Paper
