4.2 Article

Charting improvements in US registry HLA typing ambiguity using a typing resolution score

Journal

HUMAN IMMUNOLOGY
Volume 77, Issue 7, Pages 542-549

Publisher

ELSEVIER SCIENCE INC
DOI: 10.1016/j.humimm.2016.05.002

Keywords

Human leukocyte antigen; HLA typing; Typing ambiguity; Typing resolution score; Be The Match Registry

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Funding

  1. Office of Naval Research (ONR) [N00014-14-1-0848]

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Unrelated stem cell registries have been collecting HLA typing of volunteer bone marrow donors for over 25 years. Donor selection for hematopoietic stem cell transplantation is based primarily on matching the alleles of donors and patients at five polymorphic HLA loci. As HLA typing technologies have continually advanced since the beginnings of stem cell transplantation, registries have accrued typings of varied HLA typing ambiguity. We present a new typing resolution score (TRS), based on the likelihood of self-match, that allows the systematic comparison of HLA typings across different methods, data sets and populations. We apply the TRS to chart improvement in HLA typing within the Be The Match Registry of the United States from the initiation of DNA-based HLA typing to the current state of high-resolution typing using next-generation sequencing technologies. In addition, we present a publicly available online tool for evaluation of any given HLA typing. This TRS objectively evaluates HLA typing methods and can help define standards for acceptable recruitment HLA typing. (C) 2016 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved.

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