Related references
Note: Only part of the references are listed.CATH: increased structural coverage of functional space
Ian Sillitoe et al.
NUCLEIC ACIDS RESEARCH (2021)
A Fifth of the Protein World: Rossmann-like Proteins as an Evolutionarily Successful Structural unit
Kirill E. Medvedev et al.
JOURNAL OF MOLECULAR BIOLOGY (2021)
Advances in integrative structural biology: Towards understanding protein complexes in their cellular context
Samantha J. Ziegler et al.
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL (2021)
Pfam: The protein families database in 2021
Jaina Mistry et al.
NUCLEIC ACIDS RESEARCH (2021)
RCSB Protein Data Bank: Enabling biomedical research and drug discovery
David S. Goodsell et al.
PROTEIN SCIENCE (2020)
The SCOP database in 2020: expanded classification of representative family and superfamily domains of known protein structures
Antonina Andreeva et al.
NUCLEIC ACIDS RESEARCH (2020)
Expansion of the Major Facilitator Superfamily (MFS) to include novel transporters as well as transmembrane-acting enzymes
Steven C. Wang et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2020)
'IT WILL CHANGE EVERYTHING': DEEPMIND'S AI MAKES GIGANTIC LEAP IN SOLVING PROTEIN STRUCTURES
Ewen Callaway
NATURE (2020)
Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold
Martin Steinegger et al.
NATURE METHODS (2019)
SCOPe: classification of large macromolecular structures in the structural classification of proteinsextended database
John-Marc Chandonia et al.
NUCLEIC ACIDS RESEARCH (2019)
SIFTS: updated Structure Integration with Function, Taxonomy and Sequences resource allows 40-fold increase in coverage of structure-based annotations for proteins
Jose M. Dana et al.
NUCLEIC ACIDS RESEARCH (2019)
Functional analysis of Rossmann-like domains reveals convergent evolution of topology and reaction pathways
Kirill E. Medvedev et al.
PLOS COMPUTATIONAL BIOLOGY (2019)
From Electron Crystallography to Single Particle CryoEM (Nobel Lecture)
R. Henderson
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2018)
The Src module: an ancient scaffold in the evolution of cytoplasmic tyrosine kinases
Neel H. Shah et al.
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2018)
Crystal Structure of a ligand-bound LacY-Nanobody Complex
Hemant Kumar et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Single-particle cryo-EM-How did it get here and where will it go
Yifan Cheng
SCIENCE (2018)
InterPro in 2017-beyond protein family and domain annotations
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2017)
SCOPe: Manual Curation and Artifact Removal in the Structural Classification of Proteins - extended Database
John-Marc Chandonia et al.
JOURNAL OF MOLECULAR BIOLOGY (2017)
The Transporter Classification Database (TCDB): recent advances
Milton H. Saier et al.
NUCLEIC ACIDS RESEARCH (2016)
Protein Ensembles: How Does Nature Harness Thermodynamic Fluctuations for Life? The Diverse Functional Roles of Conformational Ensembles in the Cell
Guanghong Wei et al.
CHEMICAL REVIEWS (2016)
Functional innovation from changes in protein domains and their combinations
Jonathan G. Lees et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2016)
Understanding transport by the major facilitator superfamily (MFS): structures pave the way
Esben M. Quistgaard et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2016)
Structural Biology of the Major Facilitator Superfamily Transporters
Nieng Yan
ANNUAL REVIEW OF BIOPHYSICS, VOL 44 (2015)
The secretory pathway kinases
Anju Sreelatha et al.
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2015)
The history of the CATH structural classification of protein domains
Ian Sillitoe et al.
BIOCHIMIE (2015)
Major Facilitator Superfamily Porters, LacY, FucP and XylE of Escherichia coli Appear to Have Evolved Positionally Dissimilar Catalytic Residues without Rearrangement of 3-TMS Repeat Units
Ake Vaestermark et al.
JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY (2014)
SCOPe: Structural Classification of Proteins-extended, integrating SCOP and ASTRAL data and classification of new structures
Naomi K. Fox et al.
NUCLEIC ACIDS RESEARCH (2014)
Major Facilitator Superfamily (MFS) evolved without 3-transmembrane segment unit rearrangements
Ake Vastermark et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
ECOD: An Evolutionary Classification of Protein Domains
Hua Cheng et al.
PLOS COMPUTATIONAL BIOLOGY (2014)
Evolutionary mix-and-match with MFS transporters
M. Gregor Madej et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Lactose Permease and the Alternating Access Mechanism
Irina Smirnova et al.
BIOCHEMISTRY (2011)
Generation of a consensus protein domain dictionary
R. Dustin Schaeffer et al.
BIOINFORMATICS (2011)
A Database of Domain Definitions for Proteins with Complex Interdomain Geometry
Indraneel Majumdar et al.
PLOS ONE (2009)
Protein Dynamism and Evolvability
Nobuhiko Tokuriki et al.
SCIENCE (2009)
Searching protein structure databases with DaliLite v.3
L. Holm et al.
BIOINFORMATICS (2008)
The PDB is a covering set of small protein structures
D Kihara et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Structure and mechanism of the lactose permease of Escherichia coli
J Abramson et al.
SCIENCE (2003)
Multiple diverse ligands binding at a single protein site: A matter of pre-existing populations
BY Ma et al.
PROTEIN SCIENCE (2002)
Directed evolution of a (βα)8-barrel enzyme to catalyze related reactions in two different metabolic pathways
C Jürgens et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
DaliLite workbench for protein structure comparison
L Holm et al.
BIOINFORMATICS (2000)