4.6 Article

Thermodynamic Origin of Differential Excipient-Lysozyme Interactions

Journal

FRONTIERS IN MOLECULAR BIOSCIENCES
Volume 8, Issue -, Pages -

Publisher

FRONTIERS MEDIA SA
DOI: 10.3389/fmolb.2021.689400

Keywords

statistical mechanics; entropy; free energy methods; multiscale; metadynamics method; protein-protein binding; protein-excipient binding; protein hydration

Funding

  1. Centre of Doctoral Training in Emergent Macromolecular Therapy - EPSRC [EP/L015218/1, EP/N025105/1]

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This study investigates the interaction between lysozyme and different excipients to understand why tripolyphosphate causes lysozyme precipitation while citrate does not. The results show that tripolyphosphate stabilizes lysozyme more through interactions with basic residues, releasing more sodium ions into solution compared to citrate. This different mechanism may lead to cross-linking between lysozyme molecules and ultimately precipitation.
Understanding the intricate interplay of interactions between proteins, excipients, ions and water is important to achieve the effective purification and stable formulation of protein therapeutics. The free energy of lysozyme interacting with two kinds of polyanionic excipients, citrate and tripolyphosphate, together with sodium chloride and TRIS-buffer, are analysed in multiple-walker metadynamics simulations to understand why tripolyphosphate causes lysozyme to precipitate but citrate does not. The resulting multiscale decomposition of energy and entropy components for water, sodium chloride, excipients and lysozyme reveals that lysozyme is more stabilised by the interaction of tripolyphosphate with basic residues. This is accompanied by more sodium ions being released into solution from tripolyphosphate than for citrate, whilst the latter instead has more water molecules released into solution. Even though lysozyme aggregation is not directly probed in this study, these different mechanisms are suspected to drive the cross-linking between lysozyme molecules with vacant basic residues, ultimately leading to precipitation.

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