4.6 Article

Digital Twin Application for Model-Based DoE to Rapidly Identify Ideal Process Conditions for Space-Time Yield Optimization

Journal

PROCESSES
Volume 9, Issue 7, Pages -

Publisher

MDPI
DOI: 10.3390/pr9071109

Keywords

Escherichia coli; hybrid modeling; machine learning; model-assisted DoE; quality by design; upstream bioprocessing

Funding

  1. Austrian Research Promotion Agency (FFG) [859219]

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The rapid identification of optimal process conditions in a design space using model-based design of experiments helps reduce experimental effort and increase process understanding. By repeating experiments and retraining models, the certainty of the optimal conditions is achieved, leading to a significant reduction in experimental effort and improved efficiency.
The fast exploration of a design space and identification of the best process conditions facilitating the highest space-time yield are of great interest for manufacturers. To obtain this information, depending on the design space, a large number of practical experiments must be performed, analyzed, and evaluated. To reduce this experimental effort and increase the process understanding, we evaluated a model-based design of experiments to rapidly identify the optimum process conditions in a design space maximizing space-time yield. From a small initial dataset, hybrid models were implemented and used as digital bioprocess twins, thus obtaining the recommended optimal experiment. In cases where these optimum conditions were not covered by existing data, the experiment was carried out and added to the initial data set, re-training the hybrid model. The procedure was repeated until the model gained certainty about the best process conditions, i.e., no new recommendations. To evaluate this workflow, we utilized different initial data sets and assessed their respective performances. The fastest approach for optimizing the space-time yield in a three-dimensional design space was found with five initial experiments. The digital twin gained certainty after four recommendations, leading to a significantly reduced experimental effort compared to other state-of-the-art approaches. This highlights the benefits of in silico design space exploration for accelerating knowledge-based bioprocess development, and reducing the number of hands-on experiments, time, energy, and raw materials.

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