Journal
EBIOMEDICINE
Volume 70, Issue -, Pages -Publisher
ELSEVIER
DOI: 10.1016/j.ebiom.2021.103525
Keywords
COVID-19; Nasal swab/BALF; Transcriptome; Proteome; Meta-analysis; Prognostic marker; Auranofin
Funding
- DBT-IISc partnership program [IED/4/2020-MED/DBT]
- Infosys Young Investigator award [YI/2019/1106]
- DBT-BIRAC grant [BT/CS0007/CS/02/20]
- DBT-Wellcome Trust India Alliance Intermediate Fellowship [IA/I/18/1/503613]
- KVPY (Kishore Vaigyanik Protsahan Yojana) fellowship from DST, India
- PMRF (Prime Minister's Research Fellowship) from the Ministry of Education, India
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Analysis and validation revealed S100 family genes (S100A6, S100AB, S100A9, and S100P) as prognostic markers of severe COVID-19. Thioredoxin (TXN) was consistently upregulated. Auranofin, targeting Thioredoxin reductase, reduced SARS-CoV-2 replication in vitro and in a preclinical hamster model.
Background: While our battle with the COVID-19 pandemic continues, a multitude of Omics data have been generated from patient samples in various studies. Translation of these data into clinical interventions against COVID-19 remains to be accomplished. Exploring host response to COVID-19 in the upper respiratory tract can unveil prognostic markers and therapeutic targets. Methods: We conducted a meta-analysis of published transcriptome and proteome profiles of respiratory samples of COVID-19 patients to shortlist high confidence upregulated host factors. Subsequently, mRNA overexpression of selected genes was validated in nasal swabs from a cohort of COVID-19 positive/negative, symptomatic/asymptomatic individuals. Guided by this analysis, we sought to check for potential drug targets. An FDA-approved drug, Auranofin, was tested against SARS-CoV-2 replication in cell culture and Syrian hamster challenge model. Findings: The meta-analysis and validation in the COVID-19 cohort revealed 5100 family genes (S100A6, S100AB, S100A9, and S100P) as prognostic markers of severe COVID-19. Furthermore, Thioredoxin (TXN) was found to be consistently upregulated. Auranofin, which targets Thioredoxin reductase, was found to mitigate SARS-CoV-2 replication in vitro. Furthermore, oral administration of Auranofin in Syrian hamsters in therapeutic as well as prophylactic regimen reduced viral replication, IL-6 production, and inflammation in the lungs. Interpretation: Elevated mRNA level of S100s in the nasal swabs indicate severe COVID-19 disease, and FDAapproved drug Auranofin mitigated SARS-CoV-2 replication in preclinical hamster model. (C) 2021 The Author( s). Published by Elsevier B.V.
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