4.6 Article

Genomic Selection and Genome-wide Association Study for Feed-Efficiency Traits in a Farmed Nile Tilapia (Oreochromis niloticus) Population

Related references

Note: Only part of the references are listed.
Article Biotechnology & Applied Microbiology

Multi-trait GWAS using imputed high-density genotypes from whole-genome sequencing identifies genes associated with body traits in Nile tilapia

Grazyella M. Yoshida et al.

Summary: The study utilized a multi-trait genome-wide association approach to identify quantitative trait loci (QTL) and genes associated with body traits in Nile tilapia. By combining summary statistics from single-trait genome-wide association studies, the study increased the statistical power for detecting genetic associations with body traits. The high-resolution mtGWAS allowed the detection of significant SNPs linked to functional candidate genes, providing further insights into genetic variants underlying body trait variation in cichlid fish.

BMC GENOMICS (2021)

Article Biotechnology & Applied Microbiology

Genomic predictions for fillet yield and firmness in rainbow trout using reduced-density SNP panels

Rafet Al-Tobasei et al.

Summary: Genomic evaluation is a feasible strategy to improve fillet yield and quality in rainbow trout, outperforming traditional family-based breeding values. Furthermore, even with low-density SNP panels, genomic predictions show higher predictive abilities than traditional methods.

BMC GENOMICS (2021)

Article Multidisciplinary Sciences

Exploring the genetic architecture of feed efficiency traits in chickens

Jorge Augusto Petroli Marchesi et al.

Summary: This study conducted a genome-wide association study to explore candidate genomic regions responsible for chicken feed efficiency traits and identified several potential candidate genes. Novel genomic regions were also identified considering the dominance effects of SNPs and sex interaction, providing new insights on the genetic architecture of feed efficiency traits in chickens.

SCIENTIFIC REPORTS (2021)

Article Ecology

A major quantitative trait locus affecting resistance to Tilapia lake virus in farmed Nile tilapia (Oreochromis niloticus)

Agustin Barria et al.

Summary: Enhancing host resistance to infectious disease through genetic markers presents a potential genetic solution for disease control in farmed animals, as demonstrated in a study on resistance to Tilapia lake virus in Nile tilapia.

HEREDITY (2021)

Article Agriculture, Dairy & Animal Science

Genetic parameters for feed efficiency in Romane rams and responses to single-generation selection

F. Tortereau et al.

ANIMAL (2020)

Article Genetics & Heredity

Optimizing Low-Cost Genotyping and Imputation Strategies for Genomic Selection in Atlantic Salmon

Smaragda Tsairidou et al.

G3-GENES GENOMES GENETICS (2020)

Review Genetics & Heredity

Harnessing genomics to fast-track genetic improvement in aquaculture

Ross D. Houston et al.

NATURE REVIEWS GENETICS (2020)

Article Genetics & Heredity

A Genome-Wide Association Study on Feed Efficiency Related Traits in Landrace Pigs

Lu Fu et al.

FRONTIERS IN GENETICS (2020)

Article Multidisciplinary Sciences

Quantifying greenhouse gas emissions from global aquaculture

Michael J. MacLeod et al.

SCIENTIFIC REPORTS (2020)

Article Genetics & Heredity

Development and Validation of an Open Access SNP Array for Nile Tilapia (Oreochromis niloticus)

Carolina Penaloza et al.

G3-GENES GENOMES GENETICS (2020)

Article Genetics & Heredity

Distinguishing Between Nile Tilapia Strains Using a Low-Density Single-Nucleotide Polymorphism Panel

Matthew G. Hamilton et al.

FRONTIERS IN GENETICS (2020)

Article Agriculture, Dairy & Animal Science

Genomic regions and signaling pathways associated with indicator traits for feed efficiency in juvenile Atlantic salmon (Salmo salar)

Hanne Dvergedal et al.

GENETICS SELECTION EVOLUTION (2020)

Article Agriculture, Dairy & Animal Science

Beyond large-effect loci: large-scale GWAS reveals a mixed large-effect and polygenic architecture for age at maturity of Atlantic salmon

Marion Sinclair-Waters et al.

GENETICS SELECTION EVOLUTION (2020)

Article Biotechnology & Applied Microbiology

Polygenic and sex specific architecture for two maturation traits in farmed Atlantic salmon

Amin R. Mohamed et al.

BMC GENOMICS (2019)

Article Genetics & Heredity

Optimizing Genomic Prediction of Host Resistance to Koi Herpesvirus Disease in Carp

Christos Palaiokostas et al.

FRONTIERS IN GENETICS (2019)

Article Agriculture, Dairy & Animal Science

High-density genome-wide association study for residual feed intake in Holstein dairy cattle

B. Li et al.

JOURNAL OF DAIRY SCIENCE (2019)

Article Agriculture, Dairy & Animal Science

Selection for feed efficiency in Atlantic salmon using individual indicator traits based on stable isotope profiling

Hanne Dvergedal et al.

GENETICS SELECTION EVOLUTION (2019)

Review Fisheries

Selection response in fish and shellfish: a review

Trygve Gjedrem et al.

REVIEWS IN AQUACULTURE (2018)

Review Fisheries

Improving feed efficiency in fish using selective breeding: a review

Hugues de Verdal et al.

REVIEWS IN AQUACULTURE (2018)

Article Genetics & Heredity

A Genome-Wide Association Study for Host Resistance to Ostreid Herpesvirus in Pacific Oysters (Crassostrea gigas)

Alejandro P. Gutierrez et al.

G3-GENES GENOMES GENETICS (2018)

Article Agriculture, Dairy & Animal Science

Residual feed intake phenotype and gender affect the expression of key genes of the lipogenesis pathway in subcutaneous adipose tissue of beef cattle

McKenna Clare et al.

JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2018)

Article Agriculture, Dairy & Animal Science

Development of genomic predictions for harvest and carcass weight in channel catfish

Andre L. S. Garcia et al.

GENETICS SELECTION EVOLUTION (2018)

Article Multidisciplinary Sciences

Quantitative trait loci mapping for feed conversion efficiency in crucian carp (Carassius auratus)

Meixia Pang et al.

SCIENTIFIC REPORTS (2017)

Article Agriculture, Dairy & Animal Science

Genetic assessment of residual feed intake as a feed efficiency trait in the Pacific white shrimp Litopenaeus vannamei

Ping Dai et al.

GENETICS SELECTION EVOLUTION (2017)

Article Agriculture, Dairy & Animal Science

Endogenous and dietary lipids influencing feed intake and energy metabolism of periparturient dairy cows

B. Kuhla et al.

DOMESTIC ANIMAL ENDOCRINOLOGY (2016)

Article Agriculture, Dairy & Animal Science

Genomic prediction of host resistance to sea lice in farmed Atlantic salmon populations

Hsin-Yuan Tsai et al.

GENETICS SELECTION EVOLUTION (2016)

Article Multidisciplinary Sciences

The genetics of feed conversion efficiency traits in a commercial broiler line

Henry Reyer et al.

Scientific Reports (2015)

Article Agriculture, Dairy & Animal Science

Genome-wide association studies for feed intake and efficiency in two laying periods of chickens

Jingwei Yuan et al.

GENETICS SELECTION EVOLUTION (2015)

Article Agriculture, Dairy & Animal Science

The genetic parameters of feed efficiency and its component traits in the turkey (Meleagris gallopavo)

Lindsay A. Case et al.

GENETICS SELECTION EVOLUTION (2012)

Article Genetics & Heredity

GCTA: A Tool for Genome-wide Complex Trait Analysis

Jian Yang et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2011)

Review Endocrinology & Metabolism

Perspectives on concordant and discordant relations between insulin-like growth factor 1 (IGF1) and growth in fishes

Brian R. Beckman

GENERAL AND COMPARATIVE ENDOCRINOLOGY (2011)

Article Multidisciplinary Sciences

An Induced Mutation in Tomato eIF4E Leads to Immunity to Two Potyviruses

Florence Piron et al.

PLOS ONE (2010)

Article Green & Sustainable Science & Technology

Assessment of the environmental impact of carnivorous finfish production systems using life cycle assessment

J. Aubin et al.

JOURNAL OF CLEANER PRODUCTION (2009)

Article Agriculture, Dairy & Animal Science

Efficient Methods to Compute Genomic Predictions

P. M. VanRaden

JOURNAL OF DAIRY SCIENCE (2008)

Article Genetics & Heredity

PLINK: A tool set for whole-genome association and population-based linkage analyses

Shaun Purcell et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2007)

Article Endocrinology & Metabolism

Coordinated regulation of the GH/IGF system genes during refeeding in rainbow trout (Oncorhynchus mykiss)

Jean-Charles Gabillard et al.

JOURNAL OF ENDOCRINOLOGY (2006)

Review Endocrinology & Metabolism

The dawn and evolution of hormones in the adenohypophysis

Hiroshi Kawauchi et al.

GENERAL AND COMPARATIVE ENDOCRINOLOGY (2006)

Article Agriculture, Dairy & Animal Science

Feed efficiency of rainbow trout can be improved through selection:: Different genetic potential on alternative diets

A Kause et al.

JOURNAL OF ANIMAL SCIENCE (2006)

Article Agriculture, Dairy & Animal Science

Effects of fatty acid supplements on feed intake, and feeding and chewing behavior of lactating dairy cows

KJ Harvatine et al.

JOURNAL OF DAIRY SCIENCE (2006)

Article Physiology

Nutritional and hormonal control of lipolysis in isolated gilthead seabream (Sparus aurata) adipocytes

A Albalat et al.

AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY (2005)

Review Nutrition & Dietetics

The cow as a model to study food intake regulation

MS Allen et al.

ANNUAL REVIEW OF NUTRITION (2005)

Article Biochemistry & Molecular Biology

Somatotropic regulation of fish growth and adiposity:: growth hormone (GH) and somatolactin (SL) relationship

R Company et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY (2001)