4.8 Article

Bacterial colonization dynamics and antibiotic resistance gene dissemination in the hospital environment after first patient occupancy: a longitudinal metagenetic study

Related references

Note: Only part of the references are listed.
Article Public, Environmental & Occupational Health

Increase in surgical site infections caused by gram-negative bacteria in warmer temperatures: Results from a retrospective observational study

Seven Johannes Sam Aghdassi et al.

Summary: Higher temperatures are associated with increased rates of SSIs caused by gram-negative bacteria, especially for pathogens like Acinetobacter spp. Surgeries performed in months with higher average temperatures have a 10-fold higher likelihood of developing superficial SSIs with Acinetobacter spp.

INFECTION CONTROL AND HOSPITAL EPIDEMIOLOGY (2021)

Article Biology

A framework for identifying the recent origins of mobile antibiotic resistance genes

Stefan Ebmeyer et al.

Summary: The emergence of antibiotic resistance genes is influenced by mobile resistance genes acquired through horizontal gene transfer. Majority of the resistance genes originated from taxa associated with infection in humans and domestic animals, likely due to antibiotic selection pressure.

COMMUNICATIONS BIOLOGY (2021)

Article Microbiology

Toothbrush microbiomes feature a meeting ground for human oral and environmental microbiota

Ryan A. Blaustein et al.

Summary: The study revealed that toothbrush microbiomes consist of a combination of human oral-derived and environmental microbial strains, with lower taxonomic diversity but broader antimicrobial resistance gene profiles. Factors such as personal health, dental hygiene, and bathroom features may influence toothbrush microbial communities and resistomes, indicating toothbrushes could potentially serve as a reservoir for the transfer of antimicrobial resistance genes.

MICROBIOME (2021)

Article Environmental Sciences

Building upon current knowledge and techniques of indoor microbiology to construct the next era of theory into microorganisms, health, and the built environment

Patrick F. Horve et al.

JOURNAL OF EXPOSURE SCIENCE AND ENVIRONMENTAL EPIDEMIOLOGY (2020)

Review Medical Laboratory Technology

Microbiome Diagnostics

Robert Schlaberg

CLINICAL CHEMISTRY (2020)

Article Multidisciplinary Sciences

Re-epithelialization and immune cell behaviour in an ex vivo human skin model

Ana Rakita et al.

SCIENTIFIC REPORTS (2020)

Article Immunology

Early Bacterial Colonization and Antibiotic Resistance Gene Acquisition in Newborns

Tilman E. Klassert et al.

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2020)

Article Biochemistry & Molecular Biology

Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment

Kern Rei Chng et al.

NATURE MEDICINE (2020)

Article Biochemical Research Methods

A simple sequence-based filtering method for the removal of contaminants in low-biomass 16S rRNA amplicon sequencing approaches

Cristina Zubiria-Barrera et al.

JOURNAL OF MICROBIOLOGICAL METHODS (2020)

Article Infectious Diseases

Dynamics of clonal and plasmid backgrounds of Enterobacteriaceae producing acquired AmpC in Portuguese clinical settings over time

T. G. Ribeiro et al.

INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS (2019)

Article Biochemical Research Methods

Bacterial surface colonization, preferential attachment and fitness under periodic stress

Maor Grinberg et al.

PLOS COMPUTATIONAL BIOLOGY (2019)

Article Infectious Diseases

Spanish nationwide survey on Pseudomonas aeruginosa antimicrobial resistance mechanisms and epidemiology

Ester del Barrio-Tofino et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2019)

Article Biochemistry & Molecular Biology

Exploring the Hospital Microbiome by High-Resolution 16S rRNA Profiling

Pabulo H. Rampelotto et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)

Editorial Material Microbiology

Editorial: Horizontal Gene Transfer Mediated Bacterial Antibiotic Resistance

Dongchang Sun et al.

FRONTIERS IN MICROBIOLOGY (2019)

Article Environmental Sciences

Indoor Microbiome and Antibiotic Resistance on Floor Surfaces: An Exploratory Study in Three Different Building Types

Mridula Gupta et al.

INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH (2019)

Review Medicine, Research & Experimental

Uncovering the hidden microbiota in hospital and built environments: New approaches and solutions

Ana P. Christoff et al.

EXPERIMENTAL BIOLOGY AND MEDICINE (2019)

Review Biotechnology & Applied Microbiology

House dust microbiome and human health risks

Yifan Shan et al.

INTERNATIONAL MICROBIOLOGY (2019)

Article Multidisciplinary Sciences

Metagenomics analysis of bacterial structure communities within natural biofilm

Bahaa A. Hemdan et al.

HELIYON (2019)

Article Biotechnology & Applied Microbiology

Hospital Microbiome Variations As Analyzed by High-Throughput Sequencing

Marwa T. ElRakaiby et al.

OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY (2019)

Article Multidisciplinary Sciences

Structural absorption by barbule microstructures of super black bird of paradise feathers

Dakota E. McCoy et al.

NATURE COMMUNICATIONS (2018)

Article Public, Environmental & Occupational Health

VIM-positive Pseudomonas aeruginosa in a large tertiary care hospital: matched case-control studies and a network analysis

Anne F. Voor in't Holt et al.

ANTIMICROBIAL RESISTANCE AND INFECTION CONTROL (2018)

Review Immunology

Carbapenemase-Producing Organisms: A Global Scourge

Robert A. Bonomo et al.

CLINICAL INFECTIOUS DISEASES (2018)

Article Public, Environmental & Occupational Health

ICU ward design and nosocomial infection rates: a cross-sectional study in Germany

A. Stiller et al.

JOURNAL OF HOSPITAL INFECTION (2017)

Article Cell Biology

Bacterial colonization and succession in a newly opened hospital

Simon Lax et al.

SCIENCE TRANSLATIONAL MEDICINE (2017)

Review Microbiology

Whole-Genome Sequencing of Bacterial Pathogens: the Future of Nosocomial Outbreak Analysis

Scott Quainoo et al.

CLINICAL MICROBIOLOGY REVIEWS (2017)

Article Construction & Building Technology

Influence of housing characteristics on bacterial and fungal communities in homes of asthmatic children

K. C. Dannemiller et al.

INDOOR AIR (2016)

Review Biotechnology & Applied Microbiology

Shoe soles as a potential vector for pathogen transmission: a systematic review

T. Rashid et al.

JOURNAL OF APPLIED MICROBIOLOGY (2016)

Article Cell Biology

Antibiotics, birth mode, and diet shape microbiome maturation during early life

Nicholas A. Bokulich et al.

SCIENCE TRANSLATIONAL MEDICINE (2016)

Review Public, Environmental & Occupational Health

Relationship between hospital ward design and healthcare-associated infection rates: a systematic review and meta-analysis

Andrea Stiller et al.

ANTIMICROBIAL RESISTANCE AND INFECTION CONTROL (2016)

Article Public, Environmental & Occupational Health

Multidrug-resistant Gram-negative bacteria: a product of globalization

P. M. Hawkey

JOURNAL OF HOSPITAL INFECTION (2015)

Article Microbiology

Microbiota of the indoor environment: a meta-analysis

Rachel I. Adams et al.

MICROBIOME (2015)

Review Microbiology

The microbiome of the built environment and mental health

Andrew J. Hoisington et al.

MICROBIOME (2015)

Article Biochemistry & Molecular Biology

Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics

Ebrahim Afshinnekoo et al.

CELL SYSTEMS (2015)

Article Biotechnology & Applied Microbiology

Ecological Succession and Viability of Human-Associated Microbiota on Restroom Surfaces

Sean M. Gibbons et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)

Review Microbiology

Horizontal gene transfer in human pathogens

Mario Juhas

CRITICAL REVIEWS IN MICROBIOLOGY (2015)

Article Biochemical Research Methods

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony M. Bolger et al.

BIOINFORMATICS (2014)

Editorial Material Environmental Sciences

Rethinking Sterile The Hospital Microbiome

Carrie Arnold

ENVIRONMENTAL HEALTH PERSPECTIVES (2014)

Article Construction & Building Technology

Stability of airborne microbes in the Louvre Museum over time

C. Gauezere et al.

INDOOR AIR (2014)

Review Critical Care Medicine

Modern Trends in Infection Control Practices in Intensive Care Units

Sumanth Gandra et al.

JOURNAL OF INTENSIVE CARE MEDICINE (2014)

Article Microbiology

Surface Microbes in the Neonatal Intensive Care Unit: Changes with Routine Cleaning and over Time

Nicholas A. Bokulich et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2013)

Article Microbiology

Virulence potential and adherence properties of Escherichia coli that produce CTX-M and NDM β-lactamases

Gisele Peirano et al.

JOURNAL OF MEDICAL MICROBIOLOGY (2013)

Article Biochemistry & Molecular Biology

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Multidisciplinary Sciences

Bacterial Diversity in Two Neonatal Intensive Care Units (NICUs)

Krissi M. Hewitt et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

Home Life: Factors Structuring the Bacterial Diversity Found within and between Homes

Robert R. Dunn et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

The ignored diversity: complex bacterial communities in intensive care units revealed by 16S pyrosequencing

Lisa Oberauner et al.

SCIENTIFIC REPORTS (2013)

Review Public, Environmental & Occupational Health

Microbial monitoring of the hospital environment: why and how?

S. Galvin et al.

JOURNAL OF HOSPITAL INFECTION (2012)

Article Multidisciplinary Sciences

Office Space Bacterial Abundance and Diversity in Three Metropolitan Areas

Krissi M. Hewitt et al.

PLOS ONE (2012)

Article Multidisciplinary Sciences

Competition-colonization dynamics in experimental bacterial metacommunities

George Livingston et al.

NATURE COMMUNICATIONS (2012)

Article Infectious Diseases

blaIMP and blaVIM mediated carbapenem resistance in Pseudomonas and Acinetobacter species in India

M. Shanthi Amudhan et al.

JOURNAL OF INFECTION IN DEVELOPING COUNTRIES (2012)

Article Biochemical Research Methods

Inferring Correlation Networks from Genomic Survey Data

Jonathan Friedman et al.

PLOS COMPUTATIONAL BIOLOGY (2012)

Article Biology

Indoor Air Quality Related to Occupancy at an Air-conditioned Public Building

Karina Ponsoni et al.

BRAZILIAN ARCHIVES OF BIOLOGY AND TECHNOLOGY (2010)

Letter Biochemical Research Methods

QIIME allows analysis of high-throughput community sequencing data

J. Gregory Caporaso et al.

NATURE METHODS (2010)

Article Microbiology

Veillonella rogosae sp nov., an anaerobic, Gram-negative coccus isolated from dental plaque

Nausheen Arif et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)

Review Clinical Neurology

Acute ischaemic stroke and infection: recent and emerging concepts

Hedley C. A. Emsley et al.

LANCET NEUROLOGY (2008)

Article Microbiology

Hidden VIM-1 metallo-beta-lactamase phenotypes among Acinetobacter baumannii clinical isolates

Alexandros Ikonornidis et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2008)

Article Multidisciplinary Sciences

Modularity and community structure in networks

M. E. J. Newman

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

Compartments revealed in food-web structure

AE Krause et al.

NATURE (2003)

Article Microbiology

mecA gene is widely disseminated in Staphylococcus aureus population

CLC Wielders et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2002)