Related references
Note: Only part of the references are listed.An evolving view on biogeochemical cycling of iron
Andreas Kappler et al.
NATURE REVIEWS MICROBIOLOGY (2021)
Freshwater Chlorobia Exhibit Metabolic Specialization among Cosmopolitan and Endemic Populations
Sarahi L. Garcia et al.
MSYSTEMS (2021)
Metabolic Responses of a Phototrophic Co-Culture Enriched from a Freshwater Sediment on Changing Substrate Availability and its Relevance for Biogeochemical Iron Cycling
Caroline Schmidt et al.
GEOMICROBIOLOGY JOURNAL (2021)
Validating the Cyc2 Neutrophilic Iron Oxidation Pathway Using Meta-omics of Zetaproteobacteria Iron Mats at Marine Hydrothermal Vents
Sean M. Mcallister et al.
MSYSTEMS (2020)
FeGenie: A Comprehensive Tool for the Identification of Iron Genes and Iron Gene Neighborhoods in Genome and Metagenome Assemblies
Arkadiy I. Garber et al.
FRONTIERS IN MICROBIOLOGY (2020)
Anoxygenic photosynthesis and iron-sulfur metabolic potential ofChlorobiapopulations from seasonally anoxic Boreal Shield lakes
J. M. Tsuji et al.
ISME JOURNAL (2020)
DRAM for distilling microbial metabolism to automate the curation of microbiome function
Michael Shaffer et al.
NUCLEIC ACIDS RESEARCH (2020)
The biogeochemistry of ferruginous lakes and past ferruginous oceans
Elizabeth D. Swanner et al.
EARTH-SCIENCE REVIEWS (2020)
Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major functional capabilities
David W. Waite et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2020)
GToTree: a user-friendly workflow for phylogenomics
Michael D. Lee
BIOINFORMATICS (2019)
Structure of Microbial Nanowires Reveals Stacked Hemes that Transport Electrons over Micrometers
Fengbin Wang et al.
CELL (2019)
MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies
Dongwan D. Kang et al.
PEERJ (2019)
An Integrated Pipeline for Annotation and Visualization of Metagenomic Contigs
Xiaoli Dong et al.
FRONTIERS IN GENETICS (2019)
fastp: an ultra-fast all-in-one FASTQ preprocessor
Shifu Chen et al.
BIOINFORMATICS (2018)
A Mesoproterozoic iron formation
Donald E. Canfield et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
Christian M. K. Sieber et al.
NATURE MICROBIOLOGY (2018)
Microbial anaerobic Fe(II) oxidation - Ecology, mechanisms and environmental implications
Casey Bryce et al.
ENVIRONMENTAL MICROBIOLOGY (2018)
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
Chirag Jain et al.
NATURE COMMUNICATIONS (2018)
Microbial processes of the carbon and sulfur cycles in an ice-covered, iron-rich meromictic lake Svetloe (Arkhangelsk region, Russia)
Alexander S. Savvichev et al.
ENVIRONMENTAL MICROBIOLOGY (2017)
Fe isotope fractionation during Fe(II) oxidation by the marine photoferrotroph Rhodovulum iodosum in the presence of Si - Implications for Precambrian iron formation deposition
Wenfang Wu et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2017)
Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction
Tristan Wagner et al.
SCIENCE (2017)
Comparative Genomic Analysis of Neutrophilic Iron(II) Oxidizer Genomes for Candidate Genes in Extracellular Electron Transfer
Shaomei He et al.
FRONTIERS IN MICROBIOLOGY (2017)
Nutrient Acquisition and the Metabolic Potential of Photoferrotrophic Chlorobi
Katharine J. Thompson et al.
FRONTIERS IN MICROBIOLOGY (2017)
Physiological characterization of a halotolerant anoxygenic phototrophic Fe(II)-oxidizing green-sulfur bacterium isolated from a marine sediment
Katja Laufer et al.
FEMS MICROBIOLOGY ECOLOGY (2017)
Draft Genome Sequence of the Pelagic Photoferrotroph Chlorobium phaeoferrooxidans
Sean A. Crowe et al.
GENOME ANNOUNCEMENTS (2017)
MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets
Yu-Wei Wu et al.
BIOINFORMATICS (2016)
Intensive cryptic microbial iron cycling in the low iron water column of the meromictic Lake Cadagno
Jasmine S. Berg et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Anaerobic Mercury Methylation and Demethylation by Geobacter bemidjiensis Bem
Xia Lu et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2016)
Chemoautotrophy and anoxygenic photosynthesis within the water column of a large meromictic tropical lake (Lake Kivu, East Africa)
Cedric Morana et al.
LIMNOLOGY AND OCEANOGRAPHY (2016)
Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system
Karthik Anantharaman et al.
NATURE COMMUNICATIONS (2016)
New Insight into Microbial Iron Oxidation as Revealed by the Proteomic Profile of an Obligate Iron-Oxidizing Chemolithoautotroph
Roman A. Barco et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Donovan H. Parks et al.
GENOME RESEARCH (2015)
Pelagic photoferrotrophy and iron cycling in a modern ferruginous basin
Marc Lliros et al.
SCIENTIFIC REPORTS (2015)
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
Dongwan D. Kang et al.
PEERJ (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Physiology, Fe(II) oxidation, and Fe mineral formation by a marine planktonic cyanobacterium grown under ferruginous conditions
Elizabeth D. Swanner et al.
FRONTIERS IN EARTH SCIENCE (2015)
Characterization of the physiology and cell-mineral interactions of the marine anoxygenic phototrophic Fe(II) oxidizer Rhodovulum iodosum - implications for Precambrian Fe(II) oxidation
Wenfang Wu et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
Deep-water anoxygenic photosythesis in a ferruginous chemocline
S. A. Crowe et al.
GEOBIOLOGY (2014)
The interplay of microbially mediated and abiotic reactions in the biogeochemical Fe cycle
Emily D. Melton et al.
NATURE REVIEWS MICROBIOLOGY (2014)
Incomplete Wood-Ljungdahl pathway facilitates one-carbon metabolism in organohalide-respiring Dehalococcoides mccartyi
Wei-Qin Zhuang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Phototrophic Fe(II)-oxidation in the chemocline of a ferruginous meromictic lake
Xavier A. Walter et al.
FRONTIERS IN MICROBIOLOGY (2014)
QUAST: quality assessment tool for genome assemblies
Alexey Gurevich et al.
BIOINFORMATICS (2013)
Genome sequence-based species delimitation with confidence intervals and improved distance functions
Jan P. Meier-Kolthoff et al.
BMC BIOINFORMATICS (2013)
Oxidation of Fe(II) leads to increased C-2 methylation of pentacyclic triterpenoids in the anoxygenic phototrophic bacterium Rhodopseudomonas palustris strain TIE-1
M. Eickhoff et al.
GEOBIOLOGY (2013)
Microbiological processes in banded iron formation deposition
Nicole R. Posth et al.
SEDIMENTOLOGY (2013)
A Rapid Method for the Extraction and Analysis of Carotenoids and Other Hydrophobic Substances Suitable for Systems Biology Studies with Photosynthetic Bacteria
Judit Bona-Lovasz et al.
METABOLITES (2013)
The composition of Earth's oldest iron formations: The Nuvvuagittuq Supracrustal Belt (Quebec, Canada)
Aleksandra M. Mloszewska et al.
EARTH AND PLANETARY SCIENCE LETTERS (2012)
Identification of the Bacteriochlorophylls, Carotenoids, Quinones, Lipids, and Hopanoids of Candidatus Chloracidobacterium thermophilum
Amaya M. Garcia Costas et al.
JOURNAL OF BACTERIOLOGY (2012)
The Iron Biogeochemical Cycle Past and Present
Robert Raiswell et al.
Geochemical Perspectives (2012)
Beyond the Calvin Cycle: Autotrophic Carbon Fixation in the Ocean
Michael Huegler et al.
ANNUAL REVIEW OF MARINE SCIENCE, VOL 3 (2011)
Ferruginous Conditions: A Dominant Feature of the Ocean through Earth's History
Simon W. Poulton et al.
ELEMENTS (2011)
Iron Formation: The Sedimentary Product of a Complex Interplay among Mantle, Tectonic, Oceanic, and Biospheric Processes
Andrey Bekker et al.
ECONOMIC GEOLOGY (2010)
Both Forward and Reverse TCA Cycles Operate in Green Sulfur Bacteria
Kuo-Hsiang Tang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
Co-occurrence of denitrification and nitrogen fixation in a meromictic lake, Lake Cadagno (Switzerland)
Hannah Halm et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Physiology of phototrophic iron(II)-oxidizing bacteria: implications for modern and ancient environments
Florian Hegler et al.
FEMS MICROBIOLOGY ECOLOGY (2008)
Okenane, a biomarker for purple sulfur bacteria (Chromatiaceae), and other new carotenoid derivatives from the 1640 Ma Barney Creek Formation
Jochen J. Brocks et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2008)
A new iron-oxidizing/O2-reducing supercomplex spanning both inner and outer membranes, isolated from the extreme acidophile Acidithiobacillus ferrooxidans
Cindy Castelle et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
Early anaerobic metabolisms
Don E. Canfield et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)
Gene clusters involved in anaerobic benzoate degradation of Geobacter metallireducens
S Wischgoll et al.
MOLECULAR MICROBIOLOGY (2005)
Deposition of banded iron formations by anoxygenic phototrophic Fe(II)-oxidizing bacteria
A Kappler et al.
GEOLOGY (2005)
Biomarker evidence for green and purple sulphur bacteria in a stratified Palaeoproterozoic sea
JJ Brocks et al.
NATURE (2005)
Signature pigments of green sulfur bacteria in lower Pleistocene deposits from the Banyoles lacustrine area (Spain)
N Mallorquí et al.
JOURNAL OF PALEOLIMNOLOGY (2005)
Photic zone euxinia during the Permian-Triassic superanoxic event
K Grice et al.
SCIENCE (2005)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
Iron isotope fractionation by Fe(II)-oxidizing photoautotrophic bacteria
LR Croal et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2004)
Atmospheric pressure chemical ionisation liquid chromatography/mass spectrometry of bacteriochlorophylls from Chlorobiaceae: characteristic fragmentations
RL Airs et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2002)
The ferrozine method revisited: Fe(II)/Fe(III) determination in natural waters
E Viollier et al.
APPLIED GEOCHEMISTRY (2000)