Related references
Note: Only part of the references are listed.Non-tuberculous mycobacteria and the rise of Mycobacterium abscessus
Matt D. Johansen et al.
NATURE REVIEWS MICROBIOLOGY (2020)
Successful bedaquiline-containing antimycobacterial treatment in post-traumatic skin and soft-tissue infection by Mycobacterium fortuitum complex: a case report
Johanna Erber et al.
BMC INFECTIOUS DISEASES (2020)
Nontuberculous mycobacteria isolated from specimens of pulmonary tuberculosis suspects, Northern Tunisia: 2002-2016
Reem Gharbi et al.
BMC INFECTIOUS DISEASES (2019)
Mycobacterium abscessus virulence traits unraveled by transcriptomic profiling in amoeba and macrophages
Violaine Dubois et al.
PLOS PATHOGENS (2019)
Nontuberculous mycobacterial infections of the lower extremities: A 15-year experience
Mark Anthony A. Diaz et al.
JOURNAL OF CLINICAL TUBERCULOSIS AND OTHER MYCOBACTERIAL DISEASES (2019)
Improved genomic island predictions with IslandPath-DIMOB
Claire Bertelli et al.
BIOINFORMATICS (2018)
Natural history of Mycobacterium fortuitum pulmonary infection presenting with migratory infiltrates: a case report with microbiological analysis
Satoshi Okamori et al.
BMC INFECTIOUS DISEASES (2018)
Identification of genes required for Mycobacterium abscessus growth in vivo with a prominent role of the ESX-4 locus
Laura Laencina et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera
Radhey S. Gupta et al.
FRONTIERS IN MICROBIOLOGY (2018)
Cholesterol and fatty acids grease the wheels of Mycobacterium tuberculosis pathogenesis
Kaley M. Wilburn et al.
PATHOGENS AND DISEASE (2018)
EspC forms a filamentous structure in the cell envelope of Mycobacterium tuberculosis and impacts ESX-1 secretion
Ye Lou et al.
MOLECULAR MICROBIOLOGY (2017)
IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets
Claire Bertelli et al.
NUCLEIC ACIDS RESEARCH (2017)
Genomic characterization of Nontuberculous Mycobacteria
Tarcisio Fedrizzi et al.
SCIENTIFIC REPORTS (2017)
Rv3723/LucA coordinates fatty acid and cholesterol uptake in Mycobacterium tuberculosis
Evgeniya V. Nazarova et al.
ELIFE (2017)
Mycobacterial Pan-Genome Analysis Suggests Important Role of Plasmids in the Radiation of Type VII Secretion Systems
Emilie Dumas et al.
GENOME BIOLOGY AND EVOLUTION (2016)
OrthoANI: An improved algorithm and software for calculating average nucleotide identity
Imchang Lee et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
ESX secretion systems: mycobacterial evolution to counter host immunity
Matthias I. Groschel et al.
NATURE REVIEWS MICROBIOLOGY (2016)
PHASTER: a better, faster version of the PHAST phage search tool
David Arndt et al.
NUCLEIC ACIDS RESEARCH (2016)
Comparative Genomics and Proteomic Analysis of Four Non-tuberculous Mycobacterium Species and Mycobacterium tuberculosis Complex: Occurrence of Shared Immunogenic Proteins
Nomakorinte Gcebe et al.
FRONTIERS IN MICROBIOLOGY (2016)
BPGA- an ultra-fast pan-genome analysis pipeline
Narendrakumar M. Chaudhari et al.
SCIENTIFIC REPORTS (2016)
Assembly of the Mycobacterial Cell Wall
Monika Jankute et al.
ANNUAL REVIEW OF MICROBIOLOGY, VOL 69 (2015)
ESX/type VII secretion systems of mycobacteria: Insights into evolution, pathogenicity and protection
Roxane Simeone et al.
TUBERCULOSIS (2015)
Revisiting the role of phospholipases C in virulence and the lifecycle of Mycobacterium tuberculosis
Fabien Le Chevalier et al.
SCIENTIFIC REPORTS (2015)
Take five - Type VII secretion systems of Mycobacteria
Edith N. G. Houben et al.
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2014)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Mechanism-based inhibition of HsaD: a C-C bond hydrolase essential for survival of Mycobacterium tuberculosis in macrophage
Ali Ryan et al.
FEMS MICROBIOLOGY LETTERS (2014)
Genomic reconnaissance of clinical isolates of emerging human pathogen Mycobacterium abscessus reveals high evolutionary potential
Siew Woh Choo et al.
SCIENTIFIC REPORTS (2014)
Distributive Conjugal Transfer: New Insights into Horizontal Gene Transfer and Genetic Exchange in Mycobacteria
Keith M. Derbyshire et al.
MICROBIOLOGY SPECTRUM (2014)
Phagocytosis and cytokine response to rough and smooth colony variants of Mycobacterium abscessus by human peripheral blood mononuclear cells
Bodil Jonsson et al.
APMIS (2013)
Genome sequence-based species delimitation with confidence intervals and improved distance functions
Jan P. Meier-Kolthoff et al.
BMC BIOINFORMATICS (2013)
Tryptophan Biosynthesis Protects Mycobacteria from CD4 T-Cell-Mediated Killing
Yanjia J. Zhang et al.
CELL (2013)
Biochemical Properties of MutT2 Proteins from Mycobacterium tuberculosis and M. smegmatis and Their Contrasting Antimutator Roles in Escherichia coli
Pau Biak Sang et al.
JOURNAL OF BACTERIOLOGY (2013)
Secreted Acid Phosphatase (SapM) of Mycobacterium tuberculosis Is Indispensable for Arresting Phagosomal Maturation and Growth of the Pathogen in Guinea Pig Tissues
Rupangi Verma Puri et al.
PLOS ONE (2013)
PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data
Salvatore Cosentino et al.
PLOS ONE (2013)
Underlying Host Risk Factors for Nontuberculous Mycobacterial Lung Disease
Edward D. Chan et al.
SEMINARS IN RESPIRATORY AND CRITICAL CARE MEDICINE (2013)
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
Anton Bankevich et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2012)
Linking the Transcriptional Profiles and the Physiological States of Mycobacterium tuberculosis during an Extended Intracellular Infection
Kyle H. Rohde et al.
PLOS PATHOGENS (2012)
Mammalian cell entry gene family of Mycobacterium tuberculosis
Fan Zhang et al.
MOLECULAR AND CELLULAR BIOCHEMISTRY (2011)
Cholesterol catabolism as a therapeutic target in Mycobacterium tuberculosis
Hugues Ouellet et al.
TRENDS IN MICROBIOLOGY (2011)
High-Resolution Phenotypic Profiling Defines Genes Essential for Mycobacterial Growth and Cholesterol Catabolism
Jennifer E. Griffin et al.
PLOS PATHOGENS (2011)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Nontuberculous mycobacteria: opportunistic environmental pathogens for predisposed hosts
James L. Cook
BRITISH MEDICAL BULLETIN (2010)
ClgR regulation of chaperone and protease systems is essential for Mycobacterium tuberculosis parasitism of the macrophage
Megan Estorninho et al.
MICROBIOLOGY-SGM (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
Lipids of Pathogenic Mycobacteria: Contributions to Virulence and Host Immune Suppression
L. Guenin-Mace et al.
TRANSBOUNDARY AND EMERGING DISEASES (2009)
Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis
Timothy P. Stinear et al.
GENOME RESEARCH (2008)
Mycobacterial persistance requires the utilization of host cholesterol
Amit K. Pandey et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Clinical significance of Mycobacterium fortuitum isolated from respiratory specimens
Sunghoon Park et al.
RESPIRATORY MEDICINE (2008)
Type VII secretion - mycobacteria show the way
M. Abdallah Abdallah et al.
NATURE REVIEWS MICROBIOLOGY (2007)
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
Ibtissem Grissa et al.
NUCLEIC ACIDS RESEARCH (2007)
MgtC: a key player in intramacrophage survival
Eric Alix et al.
TRENDS IN MICROBIOLOGY (2007)
RNAmmer:: consistent and rapid annotation of ribosomal RNA genes
Karin Lagesen et al.
NUCLEIC ACIDS RESEARCH (2007)
A phylogenomic analysis of the Actinomycetales mce operons
Nicola Casali et al.
BMC GENOMICS (2007)
An official ATS/IDSA statement: Diagnosis, treatment, and prevention of nontuberculous mycobacterial diseases
David E. Griffith et al.
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE (2007)
Infections due to rapidly growing mycobacteria
Mary A. De Groote et al.
CLINICAL INFECTIOUS DISEASES (2006)
The crystal structure of TrpD, a metabolic enzyme essential for lung colonization by Mycobacterium tuberculosis, in complex with its substrate phosphoribosylpyrophosphate
CE Lee et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
LosA, a key glycosyltransferase involved in the biosynthesis of a novel family of glycosylated acyltrehalose lipooligosaccharides from Mycobacterium marinum
A Burguière et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
The OtsAB pathway is essential for trehalose biosynthesis in Mycobacterium tuberculosis
HN Murphy et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
VFDB: a reference database for bacterial virulence factors
LH Chen et al.
NUCLEIC ACIDS RESEARCH (2005)
Taxonomic variation in the Mycobacterium fortuitum third biovariant complex:: description of Mycobacterium boenickei sp nov., Mycobacterium neworleansense sp nov., Mycobacterium neworleansense sp nov and Mycobacterium brisbanense sp nov and recognition of Mycobacterium porcinum from human clinical isolates
MF Schinsky et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2004)
Mauve: Multiple alignment of conserved genomic sequence with rearrangements
ACE Darling et al.
GENOME RESEARCH (2004)
ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences
D Laslett et al.
NUCLEIC ACIDS RESEARCH (2004)
MmpL8 is required for sulfolipid-1 biosynthesis and Mycobacterium tuberculosis virulence
SE Converse et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Pulmonary disease caused by Mycobacterium xenopi in HIV-negative patients:: five year follow-up of patients receiving standardised treatment
PA Jenkins et al.
RESPIRATORY MEDICINE (2003)
Evidence for phylogenetic inheritance in pathogenicity of Mycobacterium
MC Leclerc et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2003)
Clinical and taxonomic status of pathogenic nonpigmented or late-pigmenting rapidly growing mycobacteria
BA Brown-Elliott et al.
CLINICAL MICROBIOLOGY REVIEWS (2002)
Nontuberculous mycobacteria in the environment
JO Falkinham
CLINICS IN CHEST MEDICINE (2002)
Phospholipases C are involved in the virulence of Mycobacterium tuberculosis
C Raynaud et al.
MOLECULAR MICROBIOLOGY (2002)
Microbial minimalism: Genome reduction in bacterial pathogens
NA Moran
CELL (2002)
Protein secretion and the pathogenesis of bacterial infections
VT Lee et al.
GENES & DEVELOPMENT (2001)
A parallel intraphagosomal survival strategy shared by Mycobacterium tuberculosis and Salmonella enterica
N Buchmeier et al.
MOLECULAR MICROBIOLOGY (2000)
Mycobacterium septicum sp nov., a new rapidly growing species associated with catheter-related bacteraemia
MF Schinsky et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2000)