4.7 Article

Complete Genome Sequence Data of a Novel Streptomyces sp. Strain A2-16, a Potential Biological Control Agent for Potato Late Blight

Journal

PLANT DISEASE
Volume 106, Issue 2, Pages 723-726

Publisher

AMER PHYTOPATHOLOGICAL SOC
DOI: 10.1094/PDIS-04-21-0858-A

Keywords

disease management; oomycetes; field crops

Categories

Funding

  1. National Key R&D Program of China [2018YFD0200808]
  2. Chongqing Natural Science Foundation [cstc2019jcyj-msxmX0127]

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Streptomyces sp. strain A2-16, isolated from potato root zone soil, has been found to inhibit the growth of Phytophthora infestans. Genome analysis revealed a large number of coding genes and secondary metabolite biosynthesis gene clusters in A2-16, potentially contributing to disease resistance in host plants. Comparison with other Streptomyces species indicated that A2-16 may be a novel species.
Streptomyces sp. strain A2-16 was recently isolated from potato root zone soil, and it could inhibit the hyphal growth of Phytophthora infestans. The A2-16 genome consisted of one chromosome of 9,765,518 bp and one plasmid of 30,948 bp with GC contents of 70.88% and 68.39%, respectively. A total of 8,518 predicted coding genes, 3 ncRNA,73 tRNA,18 rRNA genes, and 28 secondary metabolite biosynthesis gene clusters were identified. The products of the gene clusters included bioactive polyketides, terpenes, and siderophores, which might contribute to host plants against disease. The average nucleotide identity (ANI) value (82.88-91.41%) among the genome of A2-16 and other Streptomyces species suggested it might not belong to any previously sequenced species in the Streptomyces genus.

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