Journal
NUCLEIC ACIDS RESEARCH
Volume 49, Issue W1, Pages W242-W246Publisher
OXFORD UNIV PRESS
DOI: 10.1093/nar/gkab418
Keywords
-
Categories
Funding
- National Teaching Center for Experimental Biology, Peking University
Ask authors/readers for more resources
GEPIA2021 is a standalone extension of GEPIA, allowing users to perform cell type-level analysis and survival analysis, helping experimental biologists validate hypotheses and explore large datasets.
In 2017, we released GEPIA (Gene Expression Profiling Interactive Analysis) webserver to facilitate the widely used analyses based on the bulk gene expression datasets in the TCGA and the GTEx projects, providing the biologists and clinicians with a handy tool to perform comprehensive and complex data mining tasks. Recently, the deconvolution tools have led to revolutionary trends to resolve bulk RNA datasets at cell type-level resolution, interrogating the characteristics of different cell types in cancer and controlled cohorts became an important strategy to investigate the biological questions. Thus, we present GEPIA2021, a standalone extension of GEPIA, allowing users to perform multiple interactive analysis based on the deconvolution results, including cell type-level proportion comparison, correlation analysis, differential expression, and survival analysis. With GEPIA2021, experimental biologists could easily explore the large TCGA and GTEx datasets and validate their hypotheses in an enhanced resolution. GEPIA2021 is publicly accessible at http://gepia2021.cancer-pku.cn/.
Authors
I am an author on this paper
Click your name to claim this paper and add it to your profile.
Reviews
Recommended
No Data Available