4.8 Article

Novel anti-repression mechanism of H-NS proteins by a phage protein

Journal

NUCLEIC ACIDS RESEARCH
Volume 49, Issue 18, Pages 10770-10784

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkab793

Keywords

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Funding

  1. Netherlands Organization for Scientific Research [VICI 016.160.613]
  2. Human Frontier Science Program (HFSP) [RGP0014/2014]
  3. China Scholarship Council (CSC) [201506880001]
  4. National Institutes of Health [AI105013]
  5. Leiden University-Gratama fund [2020-09/W20386-1-GSL]
  6. Netherlands Organization for Scientific Research

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H-NS family proteins play important roles in genome organization and regulation of foreign genes, with gene repression directly dependent on their DNA binding modes. The protein gp4 encoded by Pseudomonas lytic phage LUZ24 can specifically interfere with the formation and stability of the bridged MvaT-DNA complex, relieving gene silencing and adversely affecting P. aeruginosa growth. Controlling H-NS conformation may provide new ways to combat Pseudomonas multidrug resistance.
H-NS family proteins, bacterial xenogeneic silencers, play central roles in genome organization and in the regulation of foreign genes. It is thought that gene repression is directly dependent on the DNA binding modes of H-NS family proteins. These proteins form lateral protofilaments along DNA. Under specific environmental conditions they switch to bridging two DNA duplexes. This switching is a direct effect of environmental conditions on electrostatic interactions between the oppositely charged DNA binding and N-terminal domains of H-NS proteins. The Pseudomonas lytic phage LUZ24 encodes the protein gp4, which modulates the DNA binding and function of the H-NS family protein MvaT of Pseudomonas aeruginosa. However, the mechanism by which gp4 affects MvaT activity remains elusive. In this study, we show that gp4 specifically interferes with the formation and stability of the bridged MvaT-DNA complex. Structural investigations suggest that gp4 acts as an 'electrostatic zipper' between the oppositely charged domains of MvaT protomers, and stabilizes a structure resembling their 'half-open' conformation, resulting in relief of gene silencing and adverse effects on P. aeruginosa growth. The ability to control H-NS conformation and thereby its impact on global gene regulation and growth might open new avenues to fight Pseudomonas multidrug resistance.

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