4.8 Article

The Polycomb protein RING1B enables estrogen-mediated gene expression by promoting enhancer-promoter interaction and R-loop formation

Journal

NUCLEIC ACIDS RESEARCH
Volume 49, Issue 17, Pages 9768-9782

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkab723

Keywords

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Funding

  1. Sylvester Comprehensive Cancer Center
  2. Florida Health Bankhead-Coley Cancer Research Program [20B15]
  3. V Foundation [DEC2020-009]
  4. Lampert Breast Cancer Research Fund
  5. Leukemia Research Foundation (Hollis Brownstein New Investigator Research Grant)
  6. AFAR (Sagol NetworkGerOmics award)
  7. Deerfield (Xseed award)
  8. NIH [1S10OD030286-01]
  9. National Cancer Institute of the National Institutes of Health [P30CA240139]

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Studying the role of RING1B, a core component of Poly-comb Repressive Complex 1, in the enhancer-promoter interaction and gene activation revealed its key role in regulating R-loop formation and RNA Pol II activity. The recruitment of RING1B to estrogen-activated genes is dependent on both estrogen receptor alpha (ER alpha) and RNA. These findings highlight the functional interplay between RING1B, RNA and ER alpha in safeguarding chromatin architecture and regulating oncogenic programs.
Polycomb complexes have traditionally been prescribed roles as transcriptional repressors, though increasing evidence demonstrate they can also activate gene expression. However, the mechanisms underlying positive gene regulation mediated by Polycomb proteins are poorly understood. Here, we show that RING1B, a core component of Poly-comb Repressive Complex 1, regulates enhancer-promoter interaction of the bonafide estrogen-activated GREB1 gene. Systematic characterization of RNA:DNA hybrid formation (R-loops), nascent transcription and RNA Pol II activity upon estrogen administration revealed a key role of RING1B in gene activation by regulating R-loop formation and RNA Pol II elongation. We also found that the estrogen receptor alpha (ER alpha) and RNA are both necessary for full RING1B recruitment to estrogen-activated genes. Notably, RING1B recruitment was mostly unaffected upon RNA Pol II depletion. Our findings delineate the functional interplay between RING1B, RNA and ER alpha to safe-guard chromatin architecture perturbations required for estrogen-mediated gene regulation and highlight the crosstalk between steroid hormones and Poly-comb proteins to regulate oncogenic programs.

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