Related references
Note: Only part of the references are listed.Targeting unique biological signals on the fly to improve MS/MS coverage and identification efficiency in metabolomics
Kevin Cho et al.
ANALYTICA CHIMICA ACTA (2021)
DecoMetDIA: Deconvolution of Multiplexed MS/MS Spectra for Metabolite Identification in SWATH-MS-Based Untargeted Metabolomics
Yandong Yin et al.
ANALYTICAL CHEMISTRY (2019)
Untargeted Metabolomics Reveals Molecular Effects of Ketogenic Diet on Healthy and Tumor Xenograft Mouse Models
David Licha et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)
Perspectives on Data Analysis in Metabolomics: Points of Agreement and Disagreement from the 2018 ASMS Fall Workshop
Erin S. Baker et al.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2019)
From mass to metabolite in human untargeted metabolomics: Recent advances in annotation of metabolites applying liquid chromatography-mass spectrometry data
William J. Nash et al.
TRAC-TRENDS IN ANALYTICAL CHEMISTRY (2019)
SWATH data independent acquisition mass spectrometry for metabolomics
Ron Bonner et al.
TRAC-TRENDS IN ANALYTICAL CHEMISTRY (2019)
Identification of small molecules using accurate mass MS/MS search
Tobias Kind et al.
MASS SPECTROMETRY REVIEWS (2018)
HMDB 4.0: the human metabolome database for 2018
David S. Wishart et al.
NUCLEIC ACIDS RESEARCH (2018)
Combining a Deconvolution and a Universal Library Search Algorithm for the Nontarget Analysis of Data-Independent Acquisition Mode Liquid Chromatography-High-Resolution Mass Spectrometry Results
Saer Samanipour et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2018)
CharmeRT: Boosting Peptide Identifications by Chimeric Spectra Identification and Retention Time Prediction
Viktoria Dorfer et al.
JOURNAL OF PROTEOME RESEARCH (2018)
Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics
Ryan Peckner et al.
NATURE METHODS (2018)
Trace Phosphate Improves ZIC-pHILIC Peak Shape, Sensitivity, and Coverage for Untargeted Metabolomics
Jonathan L. Spalding et al.
JOURNAL OF PROTEOME RESEARCH (2018)
Software Tools and Approaches for Compound Identification of LC-MS/MS Data in Metabolomics
Ivana Blazenovic et al.
METABOLITES (2018)
PECAN: library-free peptide detection for data-independent acquisition tandem mass spectrometry data
Ying S. Ting et al.
NATURE METHODS (2017)
msPurity: Automated Evaluation of Precursor Ion Purity for Mass Spectrometry-Based Fragmentation in Metabolomics
Thomas N. Lawson et al.
ANALYTICAL CHEMISTRY (2017)
Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools
Manish Sud et al.
NUCLEIC ACIDS RESEARCH (2016)
MetDIA: Targeted Metabolite Extraction of Multiplexed MS/MS Spectra Generated by Data-Independent Acquisition
Hao Li et al.
ANALYTICAL CHEMISTRY (2016)
Analysis of human plasma metabolites across different liquid chromatography/mass spectrometry platforms: Cross-platform transferable chemical signatures
Kelly H. Telu et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2016)
Mass spectral databases for LC/MS- and GC/MS-based metabolomics: State of the field and future prospects
Maria Vinaixa et al.
TRAC-TRENDS IN ANALYTICAL CHEMISTRY (2016)
MSPLIT-DIA: sensitive peptide identification for data-independent acquisition
Jian Wang et al.
NATURE METHODS (2015)
DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics
Chih-Chiang Tsou et al.
NATURE METHODS (2015)
MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis
Hiroshi Tsugawa et al.
NATURE METHODS (2015)
isoMETLIN: A Database for Isotope-Based Metabolomics
Kevin Cho et al.
ANALYTICAL CHEMISTRY (2014)
Comparison of Information-Dependent Acquisition, SWATH, and MSAll Techniques in Metabolite Identification Study Employing Ultrahigh-Performance Liquid Chromatography-Quadrupole Time-of-Flight Mass Spectrometry
Xiaochun Zhu et al.
ANALYTICAL CHEMISTRY (2014)
Identifying Small Molecules via High Resolution Mass Spectrometry: Communicating Confidence
Emma L. Schymanski et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2014)
DeMix Workflow for Efficient Identification of Cofragmented Peptides in High Resolution Data-dependent Tandem Mass Spectrometry
Bo Zhang et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
An Untargeted Metabolomic Workflow to Improve Structural Characterization of Metabolites
Igor Nikolskiy et al.
ANALYTICAL CHEMISTRY (2013)
InChI - the worldwide chemical structure identifier standard
Stephen Heller et al.
JOURNAL OF CHEMINFORMATICS (2013)
MassBank: a public repository for sharing mass spectral data for life sciences
Hisayuki Horai et al.
JOURNAL OF MASS SPECTROMETRY (2010)
Quantifying the Impact of Chimera MS/MS Spectra on Peptide Identification in Large-Scale Proteomics Studies
Stephane Houel et al.
JOURNAL OF PROTEOME RESEARCH (2010)
ProteoWizard: open source software for rapid proteomics tools development
Darren Kessner et al.
BIOINFORMATICS (2008)
Highly sensitive feature detection for high resolution LC/MS
Ralf Tautenhahn et al.
BMC BIOINFORMATICS (2008)
The metabolomics standards initiative (MSI)
Oliver Fiehn et al.
METABOLOMICS (2007)