Related references
Note: Only part of the references are listed.The Gene Ontology resource: enriching a GOld mine
Seth Carbon et al.
NUCLEIC ACIDS RESEARCH (2021)
UniProt: the universal protein knowledgebase in 2021
Alex Bateman et al.
NUCLEIC ACIDS RESEARCH (2021)
Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module
Yi-Chuan Li et al.
SCIENCE ADVANCES (2021)
Crystallographic molecular replacement using an in silico-generated search model of SARS-CoV-2 ORF8
Thomas G. Flower et al.
PROTEIN SCIENCE (2021)
Critical assessment of protein intrinsic disorder prediction
Marco Necci et al.
NATURE METHODS (2021)
Highly accurate protein structure prediction with AlphaFold
John Jumper et al.
NATURE (2021)
High-accuracy protein structure prediction in CASP14
Joana Pereira et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2021)
Structure-based protein function prediction using graph convolutional networks
Vladimir Gligorijevic et al.
NATURE COMMUNICATIONS (2021)
Pfam: The protein families database in 2021
Jaina Mistry et al.
NUCLEIC ACIDS RESEARCH (2021)
Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation
Ian Sillitoe et al.
NUCLEIC ACIDS RESEARCH (2020)
The SCOP database in 2020: expanded classification of representative family and superfamily domains of known protein structures
Antonina Andreeva et al.
NUCLEIC ACIDS RESEARCH (2020)
Improved protein structure prediction using potentials from deep learning
Andrew W. Senior et al.
NATURE (2020)
Improved protein structure prediction using predicted interresidue orientations
Jianyi Yang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Functional Innovation in the Evolution of the Calcium-Dependent System of the Eukaryotic Endoplasmic Reticulum
Daniel E. Schaffer et al.
FRONTIERS IN GENETICS (2020)
Structure and mechanism of human diacylglycerol O-acyltransferase 1
Wang Lie et al.
NATURE (2020)
MobiDB-lite 3.0: fast consensus annotation of intrinsic disorder flavors in proteins
Marco Necci et al.
BIOINFORMATICS (2020)
Improving homology modeling from low-sequence identity templates in Rosetta: A case study in GPCRs
Brian Joseph Bender et al.
PLOS COMPUTATIONAL BIOLOGY (2020)
Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold
Martin Steinegger et al.
NATURE METHODS (2019)
Why do eukaryotic proteins contain more intrinsically disordered regions?
Walter Basile et al.
PLOS COMPUTATIONAL BIOLOGY (2019)
Advances in protein structure prediction and design
Brian Kuhlman et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2019)
Introducing best single template models as reference baseline for the Continuous Automated Model Evaluation (CAMEO)
Juergen Haas et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2019)
Critical assessment of methods of protein structure prediction (CASP)-Round XIII
Andriy Kryshtafovych et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2019)
Targeting diacylglycerol acyltransferase 2 for the treatment of nonalcoholic steatohepatitis
Neeta B. Amin et al.
SCIENCE TRANSLATIONAL MEDICINE (2019)
Deep learning extends de novo protein modelling coverage of genomes using iteratively predicted structural constraints
Joe G. Greener et al.
NATURE COMMUNICATIONS (2019)
Protease-associated import systems are widespread in Gram-negative bacteria
Rhys Grinter et al.
PLOS GENETICS (2019)
Protein Data Bank: the single global archive for 3D macromolecular structure data
Stephen K. Burley et al.
NUCLEIC ACIDS RESEARCH (2019)
CATH: expanding the horizons of structure-based functional annotations for genome sequences
Ian Sillitoe et al.
NUCLEIC ACIDS RESEARCH (2019)
The Gene Ontology Resource: 20 years and still GOing strong
S. Carbon et al.
NUCLEIC ACIDS RESEARCH (2019)
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
Naihui Zhou et al.
GENOME BIOLOGY (2019)
SPOT-Disorder2: Improved Protein Intrinsic Disorder Prediction by Ensembled Deep Learning
Jack Hanson et al.
GENOMICS PROTEOMICS & BIOINFORMATICS (2019)
Continuous Automated Model EvaluatiOn (CAMEO) complementing the critical assessment of structure prediction in CASP12
Jurgen Haas et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2018)
SWISS-MODEL: homology modelling of protein structures and complexes
Andrew Waterhouse et al.
NUCLEIC ACIDS RESEARCH (2018)
P2Rank: machine learning based tool for rapid and accurate prediction of ligand binding sites from protein structure
Radoslav Krivak et al.
JOURNAL OF CHEMINFORMATICS (2018)
Chemistry and Enzymology of Disulfide Cross-Linking in Proteins
Deborah Fass et al.
CHEMICAL REVIEWS (2018)
High-resolution cryo-EM: the nuts and bolts
Dominika Elmlund et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2017)
Large-scale structure prediction by improved contact predictions and model quality assessment
Mirco Michel et al.
BIOINFORMATICS (2017)
Wolfram Syndrome: Diagnosis, Management, and Treatment
Fumihiko Urano
CURRENT DIABETES REPORTS (2016)
Finding Our Way in the Dark Proteome
Asmit Bhowmick et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2016)
The coming of age of de novo protein design
Po-Ssu Huang et al.
NATURE (2016)
Discovery and Optimization of Imidazopyridine-Based Inhibitors of Diacylglycerol Acyltransferase 2 (DGAT2)
Kentaro Futatsugi et al.
JOURNAL OF MEDICINAL CHEMISTRY (2015)
GPCR-I-TASSER: A Hybrid Approach to G Protein-Coupled Receptor Structure Modeling and the Application to the Human Genome
Jian Zhang et al.
STRUCTURE (2015)
Large-scale determination of previously unsolved protein structures using evolutionary information
Sergey Ovchinnikov et al.
ELIFE (2015)
ModBase, a database of annotated comparative protein structure models and associated resources
Ursula Pieper et al.
NUCLEIC ACIDS RESEARCH (2014)
lDDT: a local superposition-free score for comparing protein structures and models using distance difference tests
Valerio Mariani et al.
BIOINFORMATICS (2013)
(DP2)-P-2: database of disordered protein predictions
Matt E. Oates et al.
NUCLEIC ACIDS RESEARCH (2013)
Ab Initio structure prediction for Escherichia coli: towards genome-wide protein structure modeling and fold assignment
Dong Xu et al.
SCIENTIFIC REPORTS (2013)
The Proteome Folding Project: Proteome-scale prediction of structure and function
Kevin Drew et al.
GENOME RESEARCH (2011)
The structure of KPN03535 (gi|152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold
Debanu Das et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS (2010)
Protein structure prediction: when is it useful?
Yang Zhang
CURRENT OPINION IN STRUCTURAL BIOLOGY (2009)
Relative Stabilities of Conserved and Non-Conserved Structures in the OB-Fold Superfamily
Kaitlyn M. Guardino et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2009)
AutoDock4 and AutoDockTools4: Automated Docking with Selective Receptor Flexibility
Garrett M. Morris et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2009)
Discovery of a Potent, Selective, and Orally Efficacious Pyrimidinooxazinyl Bicyclooctaneacetic Acid Diacylglycerol Acyltransferase-1 Inhibitor
Alan M. Birch et al.
JOURNAL OF MEDICINAL CHEMISTRY (2009)
The challenge of protein structure determination - lessons from structural genomics
Lukasz Slabinski et al.
PROTEIN SCIENCE (2007)
Membrane topology and identification of key functional amino acid residues of murine Acyl-CoA: Diacylglycerol acyltransferase-2
Scot J. Stone et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
TM-align: a protein structure alignment algorithm based on the TM-score
Y Zhang et al.
NUCLEIC ACIDS RESEARCH (2005)
Scoring function for automated assessment of protein structure template quality
Y Zhang et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2004)
The druggable genome
AL Hopkins et al.
NATURE REVIEWS DRUG DISCOVERY (2002)
Initial sequencing and analysis of the human genome
ES Lander et al.
NATURE (2001)
Share Paper
