4.7 Article

Automated Phosphopeptide Enrichment for Gram-Positive Bacteria

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

In-Depth Characterization of the Staphylococcus aureus Phosphoproteome Reveals New Targets of Stk1

Nadine Prust et al.

Summary: This study utilized an optimized protocol for efficient phosphopeptide enrichment and LC-MS/MS to investigate protein phosphorylation in Staphylococcus aureus, resulting in a comprehensive phosphoproteome dataset that sheds light on signaling pathways in bacteria. The research significantly increased the number of phosphosite identifications compared to previous studies and identified downstream targets of a key Ser/Thr kinase in S. aureus, indicating a greater abundance of Ser/Thr kinase signaling in this bacterium.

MOLECULAR & CELLULAR PROTEOMICS (2021)

Review Biochemistry & Molecular Biology

Importance of protein Ser/Thr/Tyr phosphorylation for bacterial pathogenesis

Julie Bonne Kohler et al.

FEBS LETTERS (2020)

Review Microbiology

Protein post-translational modifications in bacteria

Boris Macek et al.

NATURE REVIEWS MICROBIOLOGY (2019)

Review Biochemistry & Molecular Biology

Goals and Challenges in Bacterial Phosphoproteomics

Paula Yague et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)

Article Biochemistry & Molecular Biology

The PRIDE database and related tools and resources in 2019: improving support for quantification data

Yasset Perez-Riverol et al.

NUCLEIC ACIDS RESEARCH (2019)

Article Chemistry, Analytical

Comprehensive Single-Shot Proteomics with FAIMS on a Hybrid Orbitrap Mass Spectrometer

Alexander S. Hebert et al.

ANALYTICAL CHEMISTRY (2018)

Article Multidisciplinary Sciences

Automated phosphopeptide enrichment from minute quantities of frozen malignant melanoma tissue

Jimmy Rodriguez Murillo et al.

PLOS ONE (2018)

Review Microbiology

Exploring the diversity of protein modifications: special bacterial phosphorylation systems

Ivan Mijakovic et al.

FEMS MICROBIOLOGY REVIEWS (2016)

Article Biochemical Research Methods

Quantitative Proteome Analyses Identify PrfA-Responsive Proteins and Phosphoproteins in Listeria monocytogenes

Sandeep Kumar Misra et al.

JOURNAL OF PROTEOME RESEARCH (2014)

Article Biochemical Research Methods

Off-Line High-pH Reversed-Phase Fractionation for In-Depth Phosphoproteomics

Tanveer S. Batth et al.

JOURNAL OF PROTEOME RESEARCH (2014)

Article Biochemical Research Methods

Quantitative Phosphoproteome Analysis of Bacillus subtilis Reveals Novel Substrates of the Kinase PrkC and Phosphatase PrpC

Vaishnavi Ravikumar et al.

MOLECULAR & CELLULAR PROTEOMICS (2014)

Article Biochemical Research Methods

pLogo: a probabilistic approach to visualizing sequence motifs

Joseph P. O'Shea et al.

NATURE METHODS (2013)

Review Biology

Why nature chose phosphate to modify proteins

Tony Hunter

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2012)

Review Biochemistry & Molecular Biology

Protein phosphorylation in bacterial signal transduction

Ahasanul Kobir et al.

BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2011)

Review Biochemical Research Methods

Catch me if you can: Mass spectrometry-based phosphoproteomics and quantification strategies

Beate Eyrich et al.

PROTEOMICS (2011)

Article Biochemical Research Methods

Phosphoproteomic Analysis Reveals the Multiple Roles of Phosphorylation in Pathogenic Bacterium Streptococcus pneumoniae

Xuesong Sun et al.

JOURNAL OF PROTEOME RESEARCH (2010)

Article Biochemical Research Methods

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang et al.

NATURE PROTOCOLS (2009)

Editorial Material Biochemistry & Molecular Biology

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

Da Wei Huang et al.

NUCLEIC ACIDS RESEARCH (2009)

Review Biochemical Research Methods

Phosphoproteomics in bacteria: towards a systemic understanding of bacterial phosphorylation networks

Carsten Jers et al.

EXPERT REVIEW OF PROTEOMICS (2008)

Article Biochemical Research Methods

Phosphoproteome analysis of E-coli reveals evolutionary conservation of bacterial Ser/Thr/Tyr phosphorylation

Boris Macek et al.

MOLECULAR & CELLULAR PROTEOMICS (2008)

Article Biochemical Research Methods

The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis

Boris Macek et al.

MOLECULAR & CELLULAR PROTEOMICS (2007)