Related references
Note: Only part of the references are listed.SNP marker assay and candidate gene identification for sex expression via genotyping-by-sequencing-based genome-wide associations (GWAS) analyses in Oriental melon (Cucumis melo L.var.makuwa)
D. S. Kishor et al.
SCIENTIA HORTICULTURAE (2021)
LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on variant call format files
Shan-Shan Dong et al.
BRIEFINGS IN BIOINFORMATICS (2021)
Development of SNP markers and validation assays in commercial Korean melon cultivars, using Genotyping-by-sequencing and Fluidigm analyses
D. S. Kishor et al.
SCIENTIA HORTICULTURAE (2020)
Genome-wide analysis on the maize genome reveals weak selection on synonymous mutations
Duan Chu et al.
BMC GENOMICS (2020)
Genetic mapping and localization of major QTL for bitterness in melon (Cucumis melo L.)
Jianli Shang et al.
SCIENTIA HORTICULTURAE (2020)
Comparative Metabolomics and Molecular Phylogenetics of Melon (Cucumis melo, Cucurbitaceae) Biodiversity
Annick Moing et al.
METABOLITES (2020)
Genotyping-by-Sequencing Derived Single Nucleotide Polymorphisms Provide the First Well-Resolved Phylogeny for the GenusTriticum(Poaceae)
Do Yoon Hyun et al.
FRONTIERS IN PLANT SCIENCE (2020)
Resequencing of 297 melon accessions reveals the genomic history of improvement and loci related to fruit traits in melon
Shi Liu et al.
PLANT BIOTECHNOLOGY JOURNAL (2020)
Genome-wide SNP-based diversity analysis and association mapping in linseed (Linum usitatissimum L.)
Neha Singh et al.
EUPHYTICA (2019)
Re-evaluation of the role of Indian germplasm as center of melon diversification based on genotyping-by-sequencing analysis
Maria Jose Gonzalo et al.
BMC GENOMICS (2019)
A comprehensive genome variation map of melon identifies multiple domestication events and loci influencing agronomic traits
Guangwei Zhao et al.
NATURE GENETICS (2019)
Evolutionary characteristics of intergenic transcribed regions indicate rare novel genes and widespread noisy transcription in the Poaceae
John P. Lloyd et al.
SCIENTIFIC REPORTS (2019)
PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format files
Chi Zhang et al.
BIOINFORMATICS (2019)
QTL mapping for melon (Cucumis melo L.) fruit traits by assembling and utilization of novel SNPs based CAPS markers
Sikandar Amanullah et al.
SCIENTIA HORTICULTURAE (2018)
Development of cleaved amplified polymorphic sequence (CAPS) and high-resolution melting (HRM) markers from the chloroplast genome of Glycyrrhiza species
Ick-Hyun Jo et al.
3 BIOTECH (2018)
Development of cleaved amplified polymorphic sequence (CAPS) and high-resolution melting (HRM) markers from the chloroplast genome of Glycyrrhiza species
Ick-Hyun Jo et al.
3 BIOTECH (2018)
Repeated domestication of melon (Cucumis melo) in Africa and Asia and a new close relative from India
Josef Endl et al.
AMERICAN JOURNAL OF BOTANY (2018)
Recent developments in olive (Olea europaea L.) genetics and genomics: applications in taxonomy, varietal identification, traceability and breeding
L. Sebastiani et al.
PLANT CELL REPORTS (2017)
Genetic Diversity, Population Structure, and Linkage Disequilibrium of an Association-Mapping Panel Revealed by Genome-Wide SNP Markers in Sesame
Chengqi Cui et al.
FRONTIERS IN PLANT SCIENCE (2017)
QTL Analyses in Multiple Populations Employed for the Fine Mapping and Identification of Candidate Genes at a Locus Affecting Sugar Accumulation in Melon (Cucumis melo L.)
Jason M. Argyris et al.
FRONTIERS IN PLANT SCIENCE (2017)
Genome-Wide Linkage-Disequilibrium Mapping to the Candidate Gene Level in Melon (Cucumis melo)
Amit Gur et al.
SCIENTIFIC REPORTS (2017)
Genotyping-by-sequencing of a melon (Cucumis melo L.) germplasm collection from a secondary center of diversity highlights patterns of genetic variation and genomic features of different gene pools
Stefano Pavan et al.
BMC GENOMICS (2017)
Genome-Wide Differentiation of Various Melon Horticultural Groups for Use in GWAS for Fruit Firmness and Construction of a High Resolution Genetic Map
Padma Nimmakayala et al.
FRONTIERS IN PLANT SCIENCE (2016)
Mapping and Introgression of QTL Involved in Fruit Shape Transgressive Segregation into 'Piel de Sapo' Melon (Cucucumis melo L.)
Aurora Diaz et al.
PLOS ONE (2014)
Good Codons, Bad Transcript: Large Reductions in Gene Expression and Fitness Arising from Synonymous Mutations in a Key Enzyme
Deepa Agashe et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Stacks: an analysis tool set for population genomics
Julian Catchen et al.
MOLECULAR ECOLOGY (2013)
Phenotypic diversity and association mapping for fruit quality traits in cultivated tomato and related species
Jiaxin Xu et al.
THEORETICAL AND APPLIED GENETICS (2013)
SNP genotyping in melons: genetic variation, population structure, and linkage disequilibrium
Cristina Esteras et al.
THEORETICAL AND APPLIED GENETICS (2013)
GAPIT: genome association and prediction integrated tool
Alexander E. Lipka et al.
BIOINFORMATICS (2012)
GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research-an update
Rod Peakall et al.
BIOINFORMATICS (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
The genome of melon (Cucumis melo L.)
Jordi Garcia-Mas et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
Fredrik Ronquist et al.
SYSTEMATIC BIOLOGY (2012)
Mapping and linkage disequilibrium analysis with a genome-wide collection of SNPs that detect polymorphism in cultivated tomato
Matthew D. Robbins et al.
JOURNAL OF EXPERIMENTAL BOTANY (2011)
Synonymous but not the same: the causes and consequences of codon bias
Joshua B. Plotkin et al.
NATURE REVIEWS GENETICS (2011)
Genome-wide genetic marker discovery and genotyping using next-generation sequencing
John W. Davey et al.
NATURE REVIEWS GENETICS (2011)
A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
Robert J. Elshire et al.
PLOS ONE (2011)
Patterns of polymorphism and linkage disequilibrium in cultivated barley
Jordi Comadran et al.
THEORETICAL AND APPLIED GENETICS (2011)
Melon Transcriptome Characterization: Simple Sequence Repeats and Single Nucleotide Polymorphisms Discovery for High Throughput Genotyping across the Species
Jose Miguel Blanca et al.
PLANT GENOME (2011)
Genetic variation, population structure and linkage disequilibrium in peach commercial varieties
Maria Jose Aranzana et al.
BMC GENETICS (2010)
Discriminant analysis of principal components: a new method for the analysis of genetically structured populations
Thibaut Jombart et al.
BMC GENETICS (2010)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
Mixed linear model approach adapted for genome-wide association studies
Zhiwu Zhang et al.
NATURE GENETICS (2010)
APPLICATIONS OF NEXT-GENERATION SEQUENCING Sequencing technologies - the next generation
Michael L. Metzker
NATURE REVIEWS GENETICS (2010)
Cucumber (Cucumis sativus) and melon (C. melo) have numerous wild relatives in Asia and Australia, and the sister species of melon is from Australia
Patrizia Sebastian et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Mutational Robustness of Ribosomal Protein Genes
Peter A. Lind et al.
SCIENCE (2010)
Most Dark Matter'' Transcripts Are Associated With Known Genes
Harm van Bakel et al.
PLOS BIOLOGY (2010)
Comparison of similarity coefficients used for cluster analysis with amplified fragment length polymorphism markers in the silkworm, Bombyx mori
Seyed Benyamin Dalirsefat et al.
JOURNAL OF INSECT SCIENCE (2009)
A high-throughput assay for rapid and simultaneous analysis of perfect markers for important quality and agronomic traits in rice using multiplexed MALDI-TOF mass spectrometry
Ardashir K. Masouleh et al.
PLANT BIOTECHNOLOGY JOURNAL (2009)
Genomewide SNP variation reveals relationships among landraces and modern varieties of rice
Kenneth L. McNally et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Melon Fruits: Genetic Diversity, Physiology, and Biotechnology Features
Hector G. Nuñez-Palenius et al.
CRITICAL REVIEWS IN BIOTECHNOLOGY (2008)
Genomic consequences of outcrossing and selfing in plants
Stephen I. Wright et al.
INTERNATIONAL JOURNAL OF PLANT SCIENCES (2008)
Molecular diversity in the Ukrainian melon collection as revealed by AFLPs and microsatellites
Padmavathi Nimmakayala et al.
Plant Genetic Resources-Characterization and Utilization (2008)
Diversity and linkage disequilibrium analysis within a selected set of cultivated tomatoes
Ralph van Berloo et al.
THEORETICAL AND APPLIED GENETICS (2008)
Relationships of cucumbers and melons unraveled:: Molecular phylogenetics of Cucumis and related genera (Benincaseae, Cucurbitaceae)
Amanuel G. Ghebretinsae et al.
AMERICAN JOURNAL OF BOTANY (2007)
Impact of mating systems on patterns of sequence polymorphism in flowering plants
Sylvain Glemin et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)
Molecular phylogeny of Cucumis species as revealed by consensus chloroplast SSR marker length and sequence variation
S. -M. Chung et al.
GENOME (2006)
Association mapping of kernel size and milling quality in wheat (Triticum aestivum L.) cultivars
F Breseghello et al.
GENETICS (2006)
DISTORTED3/SCAR2 is a putative arabidopsis WAVE complex subunit that activates the Arp2/3 complex and is required for epidermal morphogenesis
D Basu et al.
PLANT CELL (2005)
Arabidopsis MSI1 is a component of the MEA/FIE Polycomb group complex and required for seed development
C Köhler et al.
EMBO JOURNAL (2003)
Genetic analysis of Spanish melon (Cucumis melo L.) germplasm using a standardized molecular-marker array and geographically diverse reference accessions
AI Lopez-Sese et al.
THEORETICAL AND APPLIED GENETICS (2003)
Structure of linkage disequilibrium in plants
SA Flint-Garcia et al.
ANNUAL REVIEW OF PLANT BIOLOGY (2003)
Genetic diversity in melon (Cucumis melo L.):: An evaluation of African germplasm
A Mliki et al.
GENETIC RESOURCES AND CROP EVOLUTION (2001)
Comparing AFLP, RAPD and RFLP markers for measuring genetic diversity in melon
J Garcia-Mas et al.
THEORETICAL AND APPLIED GENETICS (2000)