Journal
BIOINFORMATICS
Volume 38, Issue 1, Pages 289-290Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btab469
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Funding
- Alan Turing Institute Doctoral Studentship [EPSRC] [EP/N510129/1]
- Leverhulme Trust [RPG-2018-423]
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MomentClosure.jl is a Julia package that automates the derivation of time-evolution equations for the moments of molecule numbers in chemical reaction networks using various moment closure approximations. It enhances the capabilities of modeling stochastic biochemical systems in Julia and is particularly useful when exact analytic solutions or Monte Carlo simulations are not feasible.
MomentClosure.jl is a Julia package providing automated derivation of the time-evolution equations of the moments of molecule numbers for virtually any chemical reaction network using a wide range of moment closure approximations. It extends the capabilities of modelling stochastic biochemical systems in Julia and can be particularly useful when exact analytic solutions of the chemical master equation are unavailable and when Monte Carlo simulations are computationally expensive.
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