Journal
BIOINFORMATICS
Volume 38, Issue 2, Pages 530-532Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btab602
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- VIB
- Ghent University
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ksrates is a user-friendly command-line tool used to position ancient whole-genome duplication events with respect to speciation events in a phylogeny. It compares paralog and ortholog K-S distributions derived from genomic or transcriptomic sequences, while adjusting for substitution rate differences among the lineages involved.
We present ksrates, a user-friendly command-line tool to position ancient whole-genome duplication events with respect to speciation events in a phylogeny by comparing paralog and ortholog K-S distributions derived from genomic or transcriptomic sequences, while adjusting for substitution rate differences among the lineages involved.
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