4.3 Article

Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea

Journal

MITOCHONDRIAL DNA PART B-RESOURCES
Volume 6, Issue 4, Pages 1421-1423

Publisher

TAYLOR & FRANCIS LTD
DOI: 10.1080/23802359.2021.1911715

Keywords

Diatoms; HAB species; mitochondrial genome; Thalassiosira nordenskioeldii

Funding

  1. Strategic Priority Research Program of Chinese Academy of Sciences [XDB42000000]
  2. Chinese Academy of Sciences
  3. Pioneer Hundred Talents Program
  4. Taishan Scholar Project Special Fund
  5. Qingdao Innovation and Creation Plan (Talent Development Program-5th Annual Pioneer and Innovator Leadership Award) [193-2-16-zhc]
  6. Key Research Program of Frontier Sciences, Chinese Academy of Sciences [QYZDB-SSW-DQC023]
  7. Major Scientific and Technological Innovation Project of Shandong Province [2019JZZY020706]
  8. National Natural Science Foundation of China (NSFC) Open Research Cruise - Shiptime Sharing Project of NSFC [NORC2019-01]

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The complete mitochondrial genome of Thalassiosira nordenskioeldii isolated from the East China Sea has been constructed in this study, providing genome data for this ecologically important species. Phylogenetic analysis showed that T. nordenskioeldii's mtDNA is closely related to that of Thalassiosira profunda. The high collinearity between T. nordenskioeldii, T. profunda, and Skeletonema marinoi mtDNAs suggests only minor rearrangements, facilitating evolutionary studies within the order Thalassiosirales and the class Mediophyceae.
Thalassiosira nordenskioeldii is a common harmful algal bloom (HAB) species with worldwide distribution. Although barcode sequences of this ecologically important species have been published, no genome data have been published for T. nordenskioeldii. In this study, we constructed the complete mitochondrial genome (mtDNA) of a T. nordenskioeldii strain isolated from the East China Sea. The T. nordenskioeldii mtDNA is circular and has a length of 47,038 bp and a GC content of 30.84%. The mtDNA encodes 69 genes, including 40 protein-coding (PCGs), 27 tRNA and two rRNA genes. Phylogenetic analysis using concatenated amino acid sequences of 31 shared PCGs from 37 diatom mtDNAs revealed that the mtDNA of T. nordenskioeldii was fully resolved in a clade with that of Thalassiosira profunda. The mtDNA of T. nordenskioeldii showed high collinearity with those of T. profunda and Skeletonema marinoi with only minor rearrangements. The completion of Thalassiosira mtDNAs will facilitate evolutionary studies on species of the order Thalassiosirales and the class Mediophyceae.

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