4.5 Review

How will artificial intelligence and bioinformatics change our understanding of IgA in the next decade?

Journal

SEMINARS IN IMMUNOPATHOLOGY
Volume 43, Issue 5, Pages 739-752

Publisher

SPRINGER HEIDELBERG
DOI: 10.1007/s00281-021-00847-y

Keywords

IgA nephropathy; Omics; Artificial intelligence; Imaging; Bioinformatics

Funding

  1. Projekt DEAL
  2. European Union [860329]
  3. Marie-Curie Early Stage Researcher
  4. German Research Foundation (DFG) [SFB/TRR57, SFB/TRR219, BO3755/3-1, BO3755/9-1, BO3755/13-1]
  5. German Federal Ministries of Education and Research (BMBF) [STOP-FSGS01GM1901A]
  6. Health (DEEP LIVER) [ZMVI1-2520DAT111]
  7. Economic Affairs and Energy (EMPAIA)

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IgA nephropathy is a common kidney disease characterized by complex pathophysiology and requires in-depth research using emerging technologies and integrated analysis. A comprehensive understanding of this disease can improve patient care and requires the integration of medical and clinical expertise with advanced technologies.
IgA nephropathy (IgAN) is the most common glomerulonephritis. It is characterized by the deposition of immune complexes containing immunoglobulin A (IgA) in the kidney's glomeruli, triggering an inflammatory process. In many patients, the disease has a progressive course, eventually leading to end-stage kidney disease. The current understanding of IgAN's pathophysiology is incomplete, with the involvement of several potential players, including the mucosal immune system, the complement system, and the microbiome. Dissecting this complex pathophysiology requires an integrated analysis across molecular, cellular, and organ scales. Such data can be obtained by employing emerging technologies, including single-cell sequencing, next-generation sequencing, proteomics, and complex imaging approaches. These techniques generate complex big data, requiring advanced computational methods for their analyses and interpretation. Here, we introduce such methods, focusing on the broad areas of bioinformatics and artificial intelligence and discuss how they can advance our understanding of IgAN and ultimately improve patient care. The close integration of advanced experimental and computational technologies with medical and clinical expertise is essential to improve our understanding of human diseases. We argue that IgAN is a paradigmatic disease to demonstrate the value of such a multidisciplinary approach.

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