4.6 Article

A Bayesian approach to tissue-fraction estimation for oncological PET segmentation

Journal

PHYSICS IN MEDICINE AND BIOLOGY
Volume 66, Issue 12, Pages -

Publisher

IOP PUBLISHING LTD
DOI: 10.1088/1361-6560/ac01f4

Keywords

positron emission tomography; estimation; segmentation; partial volume effects; tissue fraction effects; multi-center evaluation

Funding

  1. National Institute of Biomedical Imaging and Bioengineering [R01-EB031051, R21-EB024647]
  2. NVIDIA GPU grant
  3. NIH [1S10RR022984-01A1, 1S10OD018091-01]

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Tumor segmentation in oncological PET faces challenges due to partial-volume effects and tissue-fraction effects. The proposed Bayesian approach for tumor volume estimation outperforms conventional methods, demonstrating accurate and reliable tumor segmentation results across different clinical-scanner configurations.
Tumor segmentation in oncological PET is challenging, a major reason being the partial-volume effects (PVEs) that arise due to low system resolution and finite voxel size. The latter results in tissue-fraction effects (TFEs), i.e. voxels contain a mixture of tissue classes. Conventional segmentation methods are typically designed to assign each image voxel as belonging to a certain tissue class. Thus, these methods are inherently limited in modeling TFEs. To address the challenge of accounting for PVEs, and in particular, TFEs, we propose a Bayesian approach to tissue-fraction estimation for oncological PET segmentation. Specifically, this Bayesian approach estimates the posterior mean of the fractional volume that the tumor occupies within each image voxel. The proposed method, implemented using a deep-learning-based technique, was first evaluated using clinically realistic 2D simulation studies with known ground truth, in the context of segmenting the primary tumor in PET images of patients with lung cancer. The evaluation studies demonstrated that the method accurately estimated the tumor-fraction areas and significantly outperformed widely used conventional PET segmentation methods, including a U-net-based method, on the task of segmenting the tumor. In addition, the proposed method was relatively insensitive to PVEs and yielded reliable tumor segmentation for different clinical-scanner configurations. The method was then evaluated using clinical images of patients with stage IIB/III non-small cell lung cancer from ACRIN 6668/RTOG 0235 multi-center clinical trial. Here, the results showed that the proposed method significantly outperformed all other considered methods and yielded accurate tumor segmentation on patient images with Dice similarity coefficient (DSC) of 0.82 (95% CI: 0.78, 0.86). In particular, the method accurately segmented relatively small tumors, yielding a high DSC of 0.77 for the smallest segmented cross-section of 1.30 cm(2). Overall, this study demonstrates the efficacy of the proposed method to accurately segment tumors in PET images.

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