4.8 Article

A diffusiophoretic mechanism for ATP-driven transport without motor proteins

Journal

NATURE PHYSICS
Volume 17, Issue 7, Pages 850-+

Publisher

NATURE RESEARCH
DOI: 10.1038/s41567-021-01213-3

Keywords

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Funding

  1. German Research Foundation (DFG) [TRR 174, 269423233, SFB1032, 201269156]
  2. Excellence Cluster ORIGINS under Germany's Excellence Strategy [EXC-2094-390783311]
  3. DFG fellowship through the Graduate School of Quantitative Biosciences Munich(QBM)
  4. research network MaxSynBio via German Federal Ministry of Education and Research (BMBF)
  5. research network MaxSynBio via Max Planck Society

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This study reveals a hidden function of the Escherichia coli MinDE protein system in actively transporting functionally unrelated cargo on membranes through a diffusiophoretic mechanism. This mechanism enables the sorting of diffusive objects based on their effective size. The coupling between diffusive fluxes of MinDE and non-specific cargo via density-dependent friction represents a novel physical mechanism for establishing intracellular organization.
Protein oscillations linked to cell division in Escherichia coli are shown to localize unrelated molecules on the cell membrane via a diffusiophoretic mechanism, in which an effective friction fosters cargo transport along the fluxes set up by the proteins. The healthy growth and maintenance of a biological system depends on the precise spatial organization of molecules within the cell through the dissipation of energy. Reaction-diffusion mechanisms can facilitate this organization, as can directional cargo transport orchestrated by motor proteins, by relying on specific protein interactions. However, transport of material through the cell can also be achieved by active processes based on non-specific, purely physical mechanisms, a phenomenon that remains poorly explored. Here, using a combined experimental and theoretical approach, we discover and describe a hidden function of the Escherichia coli MinDE protein system: in addition to forming dynamic patterns, this system accomplishes the directional active transport of functionally unrelated cargo on membranes. Remarkably, this mechanism enables the sorting of diffusive objects according to their effective size, as evidenced using modular DNA origami-streptavidin nanostructures. We show that the diffusive fluxes of MinDE and non-specific cargo couple via density-dependent friction. This non-specific process constitutes a diffusiophoretic mechanism, as yet unknown in a cell biology setting. This nonlinear coupling between diffusive fluxes could represent a generic physical mechanism for establishing intracellular organization.

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