4.7 Article

Deciphering core-microbiome of rice leaf endosphere: Revelation by metagenomic and microbiological analysis of aromatic and non-aromatic genotypes grown in three geographical zones

Related references

Note: Only part of the references are listed.
Review Plant Sciences

Plant microbiome-an account of the factors that shape community composition and diversity

Khondoker M. G. Dastogeer et al.

CURRENT PLANT BIOLOGY (2020)

Article Plant Sciences

Identification and Characterization of the Core Rice Seed Microbiome

Alexander W. Eyre et al.

PHYTOBIOMES JOURNAL (2019)

Article Ecology

Saving seed microbiomes

Gabriele Berg et al.

ISME JOURNAL (2018)

Article Pathology

Clinical Metagenomic Next-Generation Sequencing for Pathogen Detection

Wei Gu et al.

Annual Review of Pathology-Mechanisms of Disease (2018)

Article Biochemistry & Molecular Biology

MicrobiomeAnalyst: a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data

Achal Dhariwal et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Genetics & Heredity

Metagenome analysis of the root endophytic microbial community of Indian rice (O. sativa L.)

Subhadipa Sengupta et al.

GENOMICS DATA (2017)

Review Biochemistry & Molecular Biology

Communication in the Phytobiome

Jan E. Leach et al.

Article Environmental Sciences

Rice bacterial endophytes: isolation of a collection, identification of beneficial strains and microbiome analysis

Iris Bertani et al.

ENVIRONMENTAL MICROBIOLOGY REPORTS (2016)

Article Biotechnology & Applied Microbiology

Different Bacterial Populations Associated with the Roots and Rhizosphere of Rice Incorporate Plant-Derived Carbon

Marcela Hernandez et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)

Review Microbiology

The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes

Pablo R. Hardoim et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2015)

Article Multidisciplinary Sciences

Structure, variation, and assembly of the root-associated microbiomes of rice

Joseph Edwards et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Review Environmental Sciences

Bacterial seed endophytes: genera, vertical transmission and interaction with plants

Sascha Truyens et al.

ENVIRONMENTAL MICROBIOLOGY REPORTS (2015)

Review Microbiology

Progress in cultivation-independent phyllosphere microbiology

Thomas Mueller et al.

FEMS MICROBIOLOGY ECOLOGY (2014)

Review Biotechnology & Applied Microbiology

Understanding and engineering beneficial plant-microbe interactions: plant growth promotion in energy crops

Kerrie Farrar et al.

PLANT BIOTECHNOLOGY JOURNAL (2014)

Review Microbiology

Viral pathogen discovery

Charles Y. Chius

CURRENT OPINION IN MICROBIOLOGY (2013)

Article Biochemical Research Methods

Practical innovations for high-throughput amplicon sequencing

Derek S. Lundberg et al.

NATURE METHODS (2013)

Article Biotechnology & Applied Microbiology

Effects of Plant Genotype and Nitrogen Level on Bacterial Communities in Rice Shoots and Roots

Kazuhiro Sasaki et al.

MICROBES AND ENVIRONMENTS (2013)

Review Biotechnology & Applied Microbiology

The plant microbiome

Thomas R. Turner et al.

GENOME BIOLOGY (2013)

Review Microbiology

Beyond the Venn diagram: the hunt for a core microbiome

Ashley Shade et al.

ENVIRONMENTAL MICROBIOLOGY (2012)

Article Biochemistry & Molecular Biology

Functional Characteristics of an Endophyte Community Colonizing Rice Roots as Revealed by Metagenomic Analysis

A. Sessitsch et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2012)

Review Nutrition & Dietetics

Defining the human microbiome

Luke K. Ursell et al.

NUTRITION REVIEWS (2012)

Letter Biochemical Research Methods

QIIME allows analysis of high-throughput community sequencing data

J. Gregory Caporaso et al.

NATURE METHODS (2010)

Article Biotechnology & Applied Microbiology

Rice Seeds as Sources of Endophytic Bacteria

Hiroko Kaga et al.

MICROBES AND ENVIRONMENTS (2009)

Review Plant Sciences

Fungal endophytes: diversity and functional roles

R. J. Rodriguez et al.

NEW PHYTOLOGIST (2009)

Article Multidisciplinary Sciences

Community proteogenomics reveals insights into the physiology of phyllosphere bacteria

Nathanael Delmotte et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Review Biotechnology & Applied Microbiology

Endophytic bacteria in the rice plant

Hironobu Mano et al.

MICROBES AND ENVIRONMENTS (2008)

Article Gastroenterology & Hepatology

A simple and rapid method for extracting bacterial DNA from intestinal microflora for ERIC-PCR detection

Jin-Long Yang et al.

WORLD JOURNAL OF GASTROENTEROLOGY (2008)

Review Microbiology

Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution

Ilana Zilber-Rosenberg et al.

FEMS MICROBIOLOGY REVIEWS (2008)

Review Multidisciplinary Sciences

Host-bacterial mutualism in the human intestine

F Bäckhed et al.

SCIENCE (2005)