Combining transposon mutagenesis and reporter genes to identify novel regulators of the topA promoter in Streptomyces

Background Identifying the regulatory factors that control transcriptional activity is a major challenge of gene expression studies. Here, we describe the application of a novel approach for in vivo identification of regulatory proteins that may directly or indirectly control the transcription of a promoter of interest in Streptomyces. Results A method based on the combination of Tn5 minitransposon-driven random mutagenesis and lux reporter genes was applied for the first time for the Streptomyces genus. As a proof of concept, we studied the topA supercoiling-sensitive promoter, whose activity is dependent on unknown regulatory factors. We found that the sco4804 gene product positively influences topA transcription in S. coelicolor, demonstrating SCO4804 as a novel player in the control of chromosome topology in these bacteria. Conclusions Our approach allows the identification of novel Streptomyces regulators that may be critical for the regulation of gene expression in these antibiotic-producing bacteria.

Automated summary

This study introduces a novel approach to identify regulatory proteins that control transcription in Streptomyces. The experimental results demonstrate that the SCO4804 gene positively influences the transcription of topA, revealing a new player in the control of chromosome topology in these bacteria.