4.6 Article

Anatomically Constrained Deep Learning for Automating Dental CBCT Segmentation and Lesion Detection

Journal

Publisher

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
DOI: 10.1109/TASE.2020.3025871

Keywords

Deep learning; Dentistry; Lesions; Image segmentation; Training; Knowledge engineering; Biomedical image segmentation; healthcare automation; machine learning; neural networks

Funding

  1. NSF DMS [1830363, 1903135]
  2. Division Of Mathematical Sciences
  3. Direct For Mathematical & Physical Scien [1903135] Funding Source: National Science Foundation
  4. Division Of Mathematical Sciences
  5. Direct For Mathematical & Physical Scien [1830363] Funding Source: National Science Foundation

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Unlike other branches of healthcare, the development of AI capabilities in dental care is relatively slow, particularly in the automation of CBCT segmentation and lesion detection. Challenges such as content-rich oral cavity, significant within-label variation, and obtaining high-quality labeled images hinder research progress in this area. Integration of oral-anatomical knowledge into deep learning algorithms can improve the accuracy of lesion detection and segmentation, even with limited training samples. This can benefit practitioners by reducing labeling efforts and enhancing the advantages of AI in dental care automation.
Compared with the rapidly growing artificial intelligence (AI) research in other branches of healthcare, the pace of developing AI capacities in dental care is relatively slow. Dental care automation, especially the automated capability for dental cone beam computed tomography (CBCT) segmentation and lesion detection, is highly needed. CBCT is an important imaging modality that is experiencing ever-growing utilization in various dental specialties. However, little research has been done for segmenting different structures, restorative materials, and lesions using deep learning. This is due to multifold challenges such as content-rich oral cavity and significant within-label variation on each CBCT image as well as the inherent difficulty of obtaining many high-quality labeled images for training. On the other hand, oral-anatomical knowledge exists in dentistry, which shall be leveraged and integrated into the deep learning design. In this article, we propose a novel anatomically constrained Dense U-Net for integrating oral-anatomical knowledge with data-driven Dense U-Net. The proposed algorithm is formulated as a regularized or constrained optimization and solved using mean-field variational approximation to achieve computational efficiency. Mathematical encoding for transforming descriptive knowledge into a quantitative form is also proposed. Our experiment demonstrates that the proposed algorithm outperforms the standard Dense U-Net in both lesion detection accuracy and dice coefficient (DICE) indices in multilabel segmentation. Benefited from the integration with anatomical domain knowledge, our algorithm performs well with data from a small number of patients included in the training. Note to Practitioners-This article proposes a novel deep learning algorithm to enable the automated capability for cone beam computed tomography (CBCT) segmentation and lesion detection. Despite the growing adoption of CBCT in various dental specialties, such capability is currently lacking. The proposed work will provide tools to help reduce subjectivity and human errors, as well as streamline and expedite the clinical workflow. This will greatly facilitate dental care automation. Furthermore, due to the capacity of integrating oral-anatomical knowledge into the deep learning design, the proposed algorithm does not require many high-quality labeled images to train. The algorithm can provide good accuracy under limited training samples. This ability is highly desirable for practitioners by saving labor-intensive, costly labeling efforts, and enjoying the benefits provided by AI.

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