4.7 Article

Prediction of tau accumulation in prodromal Alzheimer's disease using an ensemble machine learning approach

Journal

SCIENTIFIC REPORTS
Volume 11, Issue 1, Pages -

Publisher

NATURE PORTFOLIO
DOI: 10.1038/s41598-021-85165-x

Keywords

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Funding

  1. Korea Health Industry Development Institute (KHIDI) - Ministry of Health Welfare
  2. Ministry of science and ICT, Republic of Korea [HU20C0111]
  3. Ministry of Health & Welfare, Republic of Korea [HI19C1082]
  4. Korean Health Technology R&D Project, Ministry of Health & Welfare, Republic of Korea [HI19C1132]
  5. Research of Korea Centers for Disease Control and Prevention [2018-ER6203-02]
  6. Brain Research Program of the National Research Foundation (NRF) - Ministry of Science ICT [NRF-2018M3C7A1056512]
  7. Korea Health Promotion Institute [2018-ER6203-02] Funding Source: Korea Institute of Science & Technology Information (KISTI), National Science & Technology Information Service (NTIS)

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The study developed machine learning algorithms to predict abnormal tau accumulation in prodromal AD patients, suggesting that GBM and RF are effective supervised learning methods. Different combinations of data were shown to impact the predictive ability, which could provide valuable guidance for the recruitment of clinical trial participants.
We developed machine learning (ML) algorithms to predict abnormal tau accumulation among patients with prodromal AD. We recruited 64 patients with prodromal AD using the Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset. Supervised ML approaches based on the random forest (RF) and a gradient boosting machine (GBM) were used. The GBM resulted in an AUC of 0.61 (95% confidence interval [CI] 0.579-0.647) with clinical data (age, sex, years of education) and a higher AUC of 0.817 (95% CI 0.804-0.830) with clinical and neuropsychological data. The highest AUC was 0.86 (95% CI 0.839-0.885) achieved with additional information such as cortical thickness in clinical data and neuropsychological results. Through the analysis of the impact order of the variables in each ML classifier, cortical thickness of the parietal lobe and occipital lobe and neuropsychological tests of memory domain were found to be more important features for each classifier. Our ML algorithms predicting tau burden may provide important information for the recruitment of participants in potential clinical trials of tau targeting therapies.

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