4.5 Article

A General Framework for Vecchia Approximations of Gaussian Processes

Journal

STATISTICAL SCIENCE
Volume 36, Issue 1, Pages 124-141

Publisher

INST MATHEMATICAL STATISTICS
DOI: 10.1214/19-STS755

Keywords

Computational complexity; covariance approximation; directed acyclic graphs; large datasets; sparsity; spatial statistics

Funding

  1. National Science Foundation (NSF) [DMS-1521676]
  2. NSF CAREER Grant [DMS-1654083]
  3. NSF [DMS-1613219]
  4. NIH [R01ES027892]
  5. NSF Research Network for Statistical Methods for Atmospheric and Oceanic Sciences [1107046]

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This study introduces a generalization of the Vecchia method as a framework for Gaussian process (GP) approximations, which includes many popular existing GP approximation methods. By representing models with directed acyclic graphs, the sparsity of matrices necessary for inference is determined, leading to a novel sparse general Vecchia approximation.
Gaussian processes (GPs) are commonly used as models for functions, time series, and spatial fields, but they are computationally infeasible for large datasets. Focusing on the typical setting of modeling data as a GP plus an additive noise term, we propose a generalization of the Vecchia (J. Roy. Statist. Soc. Ser B 50 (1988) 297-312) approach as a framework for GP approximations. We show that our general Vecchia approach contains many popular existing GP approximations as special cases, allowing for comparisons among the different methods within a unified framework. Representing the models by directed acyclic graphs, we determine the sparsity of the matrices necessary for inference, which leads to new insights regarding the computational properties. Based on these results, we propose a novel sparse general Vecchia approximation, which ensures computational feasibility for large spatial datasets but can lead to considerable improvements in approximation accuracy over Vecchia's original approach. We provide several theoretical results and conduct numerical comparisons. We conclude with guidelines for the use of Vecchia approximations in spatial statistics.

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