4.8 Article

Machine learning active-nematic hydrodynamics

Publisher

NATL ACAD SCIENCES
DOI: 10.1073/pnas.2016708118

Keywords

deep learning; active turbulence; liquid crystals; topological defects; biomaterials

Funding

  1. Complex Dynamics and Systems Program of the Army Research Office [W911NF-19-1-0268]
  2. NSF [DMR-1828629, DMR-1905675, DMR-1710318]
  3. Army Research Office Multi-University Research Initiative [W911NF1410403]
  4. University of Chicago Materials Research Science and Engineering Center (MRSEC) through Kadanoff-Rice postdoctoral fellowships
  5. NIH [GM114627]
  6. Army Research Office [MURI: W911NF-15-1-0568]
  7. Department of Energy Basic Energy Science [DE-SC0019733]
  8. University of Chicago MRSEC - NSF [DMR-2011854]
  9. U.S. Department of Energy (DOE) [DE-SC0019733] Funding Source: U.S. Department of Energy (DOE)

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The study shows that neural networks can predict the spatiotemporal variations of multiple hydrodynamic parameters and the chaotic dynamics of the system using active nematics; it can forecast the evolution of many-body systems solely from image sequences and machine-learning algorithms inspired by physics outperform deterministic simulations in experimental setups.
Hydrodynamic theories effectively describe many-body systems out of equilibrium in terms of a few macroscopic parameters. However, such parameters are difficult to determine from microscopic information. Seldom is this challenge more apparent than in active matter, where the hydrodynamic parameters are in fact fields that encode the distribution of energy-injecting microscopic components. Here, we use active nematics to demonstrate that neural networks can map out the spatiotemporal variation of multiple hydrodynamic parameters and forecast the chaotic dynamics of these systems. We analyze biofilament/molecular-motor experiments with microtubule/kinesin and actin/myosin complexes as computer vision problems. Our algorithms can determine how activity and elastic moduli change as a function of space and time, as well as adenosine triphosphate (ATP) or motor concentration. The only input needed is the orientation of the biofilaments and not the coupled velocity field which is harder to access in experiments. We can also forecast the evolution of these chaotic many-body systems solely from image sequences of their past using a combination of autoencoders and recurrent neural networks with residual architecture. In realistic experimental setups for which the initial conditions are not perfectly known, our physics-inspired machine-learning algorithms can surpass deterministic simulations. Our study paves the way for artificial-intelligence characterization and control of coupled chaotic fields in diverse physical and biological systems, even in the absence of knowledge of the underlying dynamics.

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