4.6 Article

SNPs in genes encoding for IL-10, TNF-α, and NFκB p105/p50 are associated with clinical prognostic factors for patients with Hodgkin lymphoma

Journal

PLOS ONE
Volume 16, Issue 3, Pages -

Publisher

PUBLIC LIBRARY SCIENCE
DOI: 10.1371/journal.pone.0248259

Keywords

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Funding

  1. Sao Paulo Research Foundation - FAPESP [2006/00591-5]
  2. State University of Sao Paulo (UNESP)
  3. Brazilian Coordination for the Improvement of Higher Education Personnel - CAPES [BEX: 9370/12-9]

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The study evaluated SNPs in genes encoding key cytokines in Hodgkin lymphoma and found that certain genotypes were associated with prognostic parameters in cHL patients. This study also described the association of SNP/iNFKB1 with clinical features of the disease for the first time.
Classical Hodgkin lymphoma (cHL) is a B-cell-derived malignant neoplasia that has a unique histological distribution, in which the scarce malignant Hodgkin and Reed-Sternberg cells are surrounded by nonmalignant inflammatory cells. The interactions between the malignant and inflammatory cells are mediated by aberrantly produced cytokines, which play an important role in tumor immunopathogenesis. Single nucleotide polymorphisms (SNPs) in genes encoding cytokines and their regulatory proteins may influence the peripheral levels of these molecules and affect disease's pathobiology. In this study, we evaluate SNPs in the promoter regions of the genes encoding for two key cytokines in Hodgkin lymphoma: IL-10 (SNP/p/L10-592, rs1800872; and SNP/p/L10-1082, rs1800896) and TNF-alpha (SNP/p TNF-238, rs361525; and SNP/p TNF-862, rs1800630), as well as an SNP in the intronic region of the NFKB1 gene (SNP/iNFKB1, rs1585215), an important regulator of cytokine gene expression. We then look to their possible association with clinical and laboratory features in cHL patients. Seventy-three patients with cHL are genotyped by qPCR-high resolution melting. The SNPs' genotypes are analyzed individually for each SNP, and when more than two allelic combinations are identified, the genotypes are also divided into two groups according to proposed biological relevance. By univariate analysis, patients harboring SNP/pTNF-238 AG genotype more frequently have EBV-associated cHL compared to homozygous GG, whereas the presence of mediastinal disease (bulky and nonbulky) is more common in the p/L10-592 AC/CC group compared to the AA homozygous group. Patients with SNP/iNFKB1 AA genotype more frequently have stage IV and extranodal disease at diagnosis. These results indicate that some SNPs' genotypes for IL-10 and TNF-alpha genes are associated with prognostic parameters in cHL. For the first time, the SNP/iNFKB1 is described in association with clinical features of the disease.

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