4.6 Article

Ab Initio Dot Structures Beyond the Lewis Picture

Journal

MOLECULES
Volume 26, Issue 4, Pages -

Publisher

MDPI
DOI: 10.3390/molecules26040911

Keywords

probability density analysis; electronic structure; Lewis structures; chemical bonding; similarity; clustering; spin coupling

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Researchers are interested in enhancing the Lewis model of the chemical bond and connecting it to computable quantities. They have expanded the topological probability density analysis to molecules with multiple bonds and lone pairs, identifying structures that differ from the traditional Lewis model but show potentially better predictive capability.
The empirical Lewis picture of the chemical bond dominates the view chemists have of molecules, of their stability and reactivity. Within the mathematical framework of quantum mechanics, all this chemical information is hidden in the many-particle wave function Psi. Thus, to reveal and understand it, there is great interest in enhancing the Lewis model and connecting it to computable quantities. As has previously been shown, the Lewis picture can often be recovered from the probability density vertical bar Psi vertical bar(2) with probabilities in agreement with valence bond weights: the structures appear as most likely positions in the all-electron configuration space. Here, we systematically expand this topological probability density analysis to molecules with multiple bonds and lone pairs, employing correlated Slater-Jastrow wave functions. In contrast to earlier studies, non-Lewis structures are obtained that disagree with the prevalent picture and have a potentially better predictive capability. While functional groups are still recovered with these ab initio structures, the boundary between bonds and lone pairs is mostly blurred or non-existent. In order to understand the newly found structures, the Lewis electron pairs are replaced with spin-coupled electron motifs as the fundamental electronic fragment. These electron motifs-which coincide with Lewis' electron pairs for many single bonds-arise naturally from the generally applicable analysis presented. An attempt is made to rationalize the geometry of the newly-found structures by considering the Coulomb force and the Pauli repulsion.

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